Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00985 ATGGTGGCTGAGGCTTGCTTGGATGGAGATACGATTTCAAATGAGACGACAGGATCAACGAGTGATCATCCACCAGTTCAAGGTCCTGAAAATACCCAAGAAATGGATGGCAGGCAGCAGGATTCCAAGAAGAACAAAGTGAAGGGTGAAAGCAATAAAACAGTACCCTTTTATAAACTTTTCTCATTTGCAGACTCTTGGGATTGTCTTCTGATGGTTGTTGGGGCAATAAGTGCTGTTGGTAATGGAATCTCTATGCCTTTAATGACTATACTTATTGGAGATGCGATTGATGCTTTCGGAGGAAATGTTGACAATAAACAAGCAGTTGTTCATCAAGTTTATAAGGCATCTCTGAAGTTTGCATCCATAGGCGCAGGTGCCTTTTTGGCAGCATTCTTGCAGGTGTCTTGTTGGGTGATCACTGGGGAGAGACAAACTGCCAGAATAAGAGGCTTATACCTCAAAGCAATCTTGAGGCAAGATATCAGCTTCTTTGACAAGGAAACTGTGGAGAGGTTGTTGGAAGGATGTCAGGTGACACAGTTCTTATTCAAGAAGCCATGGGAGAGAAGCATCTCATCAACAGTAAATATTTTGacattgtcatccaatcataaattgttatgtatgGTAGGAAAATTCATACAGTATGTGGCATGTTTTTTTGGAGGTATAGCCATAGCATTCATCAAGGGTTGGCTTCTAAGCCTTGTTCTTCTATCTTCTCTCCCGCTTCTTGTCCTCTCTGGTTCCGTAATGAGCTTTGCTTTTGCAAAGATGGCATCCCGAGGACAAACAGCTTATTCTGAAGCAGCTACTGTAGTGGAGCGAACAATTGGTTCAATTCGAACCGTTGCATCATTTACGGGTGAGAAGCAAGCTAGAGCTCAATACGACGAATACTTAACTAAAGCTTACAGAGTAGGAGTGCAAGAGGGTGTGGCTGGTGGGTTTGGCTTTGGTTTAGTTCGTCTATTTATTTACTGTACCTATGGTTTGGCAGTATGGTTCGGAGGGAAGATGGTACTAGAGAAAGGTTATACAGGAGGACAAGTGATTAGTGTATTTTTTGCAGTTTTGACTGGTTCCATGTCACTGGGGCAGGCATCTCCAAGCTTAACTGCATTTGCTGCAGGACAAGCCGCTGCCTTTAAAACGTTTGAAACAATAAAGAGACGACCAGATATTGATGCTTATGAGCCTTATGGTCAACAGCCATATGATATTCCCGGCGATATAGAACTTAGAGAGGTTTGCTTTAGTTATCCTTCAAGACCTGATGAACTGATATTCAATGGATTTTCAATTTCGATACCAAGTGGCACTACAGCAGCTTTGGTAGGGCAAAGTGGGAGTGGGAAATCAACAGTTATTAGTTTTATTGAGAGATTTTATGATCAACAAGCTGGTGAAGTTCTCATTGACGGAATCAATCTCAGAGAATTTCAATTGAAATGGATCAGACAAAAAATCAGCCTTGTCAGCCAGGAACCAGTTCTCTTTGCTTATAGCATTAAAGAGAATATAGCCTATGGTAAGGATGGGGCAACACATGAAGAAATCAGAGCTGCAGCTGACCTTGCTAATGCTGCTAAGTTCATTGATATATTTCCCAATGGACTTGACACGATGGTTGGCGAGCATGGAACTCAGCTCTCTGGAGGTCAAAAACAAAGAATATCTATAGCAAGAGCAATTCTGAAGGACCCAAGAATTCTGCTCCTTGATGAAGCTACAAGTGCTCTTGATGCAGAATCAGAGAGAGTGGTGCAAGAGATACTAGACAGAATTATGATAAACCGAACAACTGTCATTGTAGCCCACTGCCTAAGCACAATAAGGAATGCTGATGTCATTGCAGTTATTCATCAAGGAACAGTAATAGAAAAAGCACACATGCTGAGCTCACTAAAGATCCTGATGCAGCTTTTAGCCAGCTCATTAGATTGCAAGAAATTAAAAGGGAATCAGAACAGCATGTTGGAAATGACAGGCTGGCCAGAAAACTTTGTAGATTCTGAACGACAATTGAGCCAACGGCTTTCTTTCCCTGAATCTTTAAGTCGGGGATCATCTGGAAGAAGAAACGGCTGCCAACACTCGTTCGAAATATCAAATGCCATGCCTACCTCACCAGATCTCTTTGAAACATCAGAAGGAGGGCCTGAAATTCTTCCTTCAGTAGCATCACATAAACCTCAAGAAGTCTCACTTCTCTGCGTTACTTATCTTAACAAGCCTGAAATCCCAGTGTTACTCTTGGGGACTGTAGCAGCAGCAGCAACTGGGCAATACTACCCACCtgtggctgccttcatatttcttccattaaggtcctaccttttttctgtagctggttctaagttgataaaaaggatccggcttatgtgttttgagaaaataattcacatggaaataggctggtttgataaagctgagaattcaagtggagcacttggagcaaggctctcaactgatgcggcttctattcgaaccttggttggggatgctcttggtttgctggttcaagattttgctactgcaattACAGCCTTGGTAATTGCCTTTGACGCAAACTGGAAGCTTTCTCTCATTATTCTTGTTTTGGTACCTCTACTATTACTAAATGGACATTTGCAAATAAAGTCCATGCAAGGATTCAGCACCAATGTAAAGAAACTATATGAGGAAGCAAGTCAAGTAGCGAGTGATGCAGTGGGGAATATCAGAACAGTTGCCGCTTTCTGTGCTGAAGAGAAGGTGATGGAGTTATACCAGAAAAAATGTTTAGGACCAATTCAGACAGGTATAAGGCAAGGTTTAGTCAGCGGAACAGGTTTTGGCTTATCACTCTTCTTTCTGTTCTCTGTTTATGCATGCAGTTTTTATGCTGGGGCCAGACTTGTGGAGAGTGGCAAAACATCAATCTCTGATGTTTTCCGTTTAAGTTATTGTCTGATGTTTGTATTTTTTGCTCTCTCTATGGCAGCTATAGCAATGTCACAATCTGGCTTCATGACCCCTGCTGCAAGTAAAGCAAAAAGTTCTGCTGCTTCTGTATTTGCCATTCTTGATCAGAAATCAAGAATAGACCCCAGTGATGAGTCTGGAATGACATTGCAAGAAGTGAATGGAGAGATTGGGTTCCACCATGTCACTTTCAAGTATCCAACAAGGCCTAATGTTCTTGTATTCAAAGATCTTTCCTTGAACATTCATGCAGGAGAGACAGTTGCTCTAGTAGGTGAAAGCGGAAGTGGAAAGTCAACAGTGATCTCATTGCTACAAAGATTTTATGGCCCAGATTCGGGTCAGATTACACTTGATGGAACAGAAATCCAAAAGCTACAACTTAAATGGTTTAGGCGGCAGATGGGCCTGGTAAGCCAGGAGCCTGTGTTGTTTAACGACACCATCCGAGCCAATATTGGGTATGGAAAATGTGGTGATGCAACAGAAGCTGAAATTATAGCTGCTGCAGAACTGGCAAATGCCCACAAGTTCATTAGCAGTTTGCAGCAGGGTTATGATACATTGGTAGGGGAGAGAGGGATTCAACTATCTGGAGGACAGAAGCAGCGGGTGGCAATTGCAAGAGCCATAGTGAAGAGTCCAAAAATATTACTGCTAGATGAAGCCACAAGTGCACTTGATGCTGAGTCTGAAAGAGTGGTTCAGGATGCGCTTGATCGAGTGAGGGTGGATAGAACCACCATTGTGGTAGCTCACAGGTTATCCACCATAAAGGATGCAGATTCAATTGCAGTGGTTGAAAATGGAGTCATTGCAGAGAAAGGAAAGCAGGAAACTTTGCTTAACAAAGTCAACATCAATCGGGCTGAGGATGGAAGACGTTCCCTGACATTATTGTTCAAAGCCATATCTTCGAAATTAAAAGCAGCACATGGACGGGACCGGAAAGCCACGTTATTGATTATTCAATCATTAGAGgacatatatgtgtgggatagaggcgtcacaGGTATGGGCAATTGGGCATGCCTTTTCATTATTTCATGGCATCCTGATCCACTGCCACAAACTTCTCTCAAATTTCACAACCAATAA 4071 0.393 MVAEACLDGDTISNETTGSTSDHPPVQGPENTQEMDGRQQDSKKNKVKGESNKTVPFYKLFSFADSWDCLLMVVGAISAVGNGISMPLMTILIGDAIDAFGGNVDNKQAVVHQVYKASLKFASIGAGAFLAAFLQVSCWVITGERQTARIRGLYLKAILRQDISFFDKETVERLLEGCQVTQFLFKKPWERSISSTVNILTLSSNHKLLCMVGKFIQYVACFFGGIAIAFIKGWLLSLVLLSSLPLLVLSGSVMSFAFAKMASRGQTAYSEAATVVERTIGSIRTVASFTGEKQARAQYDEYLTKAYRVGVQEGVAGGFGFGLVRLFIYCTYGLAVWFGGKMVLEKGYTGGQVISVFFAVLTGSMSLGQASPSLTAFAAGQAAAFKTFETIKRRPDIDAYEPYGQQPYDIPGDIELREVCFSYPSRPDELIFNGFSISIPSGTTAALVGQSGSGKSTVISFIERFYDQQAGEVLIDGINLREFQLKWIRQKISLVSQEPVLFAYSIKENIAYGKDGATHEEIRAAADLANAAKFIDIFPNGLDTMVGEHGTQLSGGQKQRISIARAILKDPRILLLDEATSALDAESERVVQEILDRIMINRTTVIVAHCLSTIRNADVIAVIHQGTVIEKAHMLSSLKILMQLLASSLDCKKLKGNQNSMLEMTGWPENFVDSERQLSQRLSFPESLSRGSSGRRNGCQHSFEISNAMPTSPDLFETSEGGPEILPSVASHKPQEVSLLCVTYLNKPEIPVLLLGTVAAAATGQYYPPVAAFIFLPLRSYLFSVAGSKLIKRIRLMCFEKIIHMEIGWFDKAENSSGALGARLSTDAASIRTLVGDALGLLVQDFATAITALVIAFDANWKLSLIILVLVPLLLLNGHLQIKSMQGFSTNVKKLYEEASQVASDAVGNIRTVAAFCAEEKVMELYQKKCLGPIQTGIRQGLVSGTGFGLSLFFLFSVYACSFYAGARLVESGKTSISDVFRLSYCLMFVFFALSMAAIAMSQSGFMTPAASKAKSSAASVFAILDQKSRIDPSDESGMTLQEVNGEIGFHHVTFKYPTRPNVLVFKDLSLNIHAGETVALVGESGSGKSTVISLLQRFYGPDSGQITLDGTEIQKLQLKWFRRQMGLVSQEPVLFNDTIRANIGYGKCGDATEAEIIAAAELANAHKFISSLQQGYDTLVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDRVRVDRTTIVVAHRLSTIKDADSIAVVENGVIAEKGKQETLLNKVNINRAEDGRRSLTLLFKAISSKLKAAHGRDRKATLLIIQSLEDIYVWDRGVTGMGNWACLFIISWHPDPLPQTSLKFHNQ 1356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00985 1356 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 73 379 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g00985 1356 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524
Gma13g00985 1356 Pfam ABC transporter 1067 1216 IPR003439 GO:0005524
Gma13g00985 1356 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1048 1285 IPR003439 GO:0005524
Gma13g00985 1356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1037 1275 IPR027417 -
Gma13g00985 1356 CDD ABC_6TM_Pgp_ABCB1_D1_like 72 375 - -
Gma13g00985 1356 MobiDBLite consensus disorder prediction 1 48 - -
Gma13g00985 1356 CDD ABC_6TM_Pgp_ABCB1_D2_like 744 1031 - -
Gma13g00985 1356 Gene3D - 404 634 IPR027417 -
Gma13g00985 1356 Gene3D - 1038 1278 IPR027417 -
Gma13g00985 1356 ProSitePatterns ABC transporters family signature. 1188 1202 IPR017871 GO:0005524
Gma13g00985 1356 MobiDBLite consensus disorder prediction 10 35 - -
Gma13g00985 1356 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 48 768 IPR039421 -
Gma13g00985 1356 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 770 1276 IPR039421 -
Gma13g00985 1356 PANTHER TRANSPORTER ABC DOMAIN PROTEIN 48 768 - -
Gma13g00985 1356 Pfam ABC transporter 433 581 IPR003439 GO:0005524
Gma13g00985 1356 PANTHER TRANSPORTER ABC DOMAIN PROTEIN 770 1276 - -
Gma13g00985 1356 CDD ABC_MTABC3_MDL1_MDL2 1048 1273 - -
Gma13g00985 1356 CDD ABC_MTABC3_MDL1_MDL2 414 631 - -
Gma13g00985 1356 Pfam ABC transporter transmembrane region 73 171 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g00985 1356 Pfam ABC transporter transmembrane region 212 365 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g00985 1356 Pfam ABC transporter transmembrane region 770 991 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g00985 1356 Gene3D ABC transporter type 1, transmembrane domain 770 987 IPR036640 GO:0005524|GO:0016021
Gma13g00985 1356 Gene3D ABC transporter type 1, transmembrane domain 988 1037 IPR036640 GO:0005524|GO:0016021
Gma13g00985 1356 Gene3D ABC transporter type 1, transmembrane domain 59 403 IPR036640 GO:0005524|GO:0016021
Gma13g00985 1356 SUPERFAMILY ABC transporter transmembrane region 59 402 IPR036640 GO:0005524|GO:0016021
Gma13g00985 1356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 406 631 IPR027417 -
Gma13g00985 1356 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 414 650 IPR003439 GO:0005524
Gma13g00985 1356 SUPERFAMILY ABC transporter transmembrane region 770 1032 IPR036640 GO:0005524|GO:0016021
Gma13g00985 1356 SMART AAA_5 441 648 IPR003593 -
Gma13g00985 1356 SMART AAA_5 1075 1268 IPR003593 -
Gma13g00985 1356 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 770 1003 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00985 Gma-Chr13 23955490 23966845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00985 40 1275 Calmodulin-binding Proteins AT2G36910 40.659 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00985 K05658 - gmx:100800293 1512.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00384 17 3118959 3124884 Gma13g00985 13 23955490 23966845 GST