Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00948 ATGGCATCTTCAGAGAATGAACCTTGTCACTCTCCTTCTGCCTCTGATCAATCCCCTTCTCCTCCTTCTCCTCCTTCCAATGTCTGTATGCAGAAATTTAGGCTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACATATTGGAAAGTACTAAAGATTGACCGTCTTGATCCTTCCGAGCTAAATTTGCGTGAAGATTCCACCACATATACAGAAAGTGAATGTTCTGATCTTTTGAGACGGATACATGAGGGTAACAAGTCCACAGGTGGACTAAAATTTGTTACAACTTGTTATGGAATTGTAGGGTTCATCAAATTTTTGGGGCCTTACTACATGCTGCTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTATATGCTGTCTCAAAGAGCGAGATGATTCCATTGCCAAATTCTTCAGTTCGGTCTAACATCAATTCTAAAAATGAAAACAGGTACAAGAGGCTCCTATGCATGGTTGACCTTACAAAGGATTTCTTTTTCAGCTACTCATACCACATTATGCGTAGTCTTCAAAGGAACATGTGTGATGATGAGACAGGCCATATTCTTTATGAGACCATGTTTGTTTGGAACGAATTCTTAACTCGAGGAATTCGGAATCACCTCCAGAATACTATTTGGACAGTTGCACTAGTGTATGGATTTTTTAAACAGGAAATGCTTATGATATCCAGACGGGAGTTCACACTTACGCTCATTGCAAGACGATCACGTCATTATGCTGGCACTAGGTATTTGAGGCGTGGTGTTAATGAGAAAGGAAGAGTAGCAAATGATGTTGAGACAGAACAAATAGTCTTTGAGGATGTTGCTGAAGGTCTTCCCATCCAAATAAGCTCTATCATCCAGAACCGTGGTTCAATCCCTCTTTTCTGGTCACAGGAAACTTCAAAACTAAATATTAAACCAGATATTATATTGTCAAAAAAGGATCAGAATTATCAAGCCACTAGACTTCACTTTGAAAACCTTGTCAAAAGATATGGGAATCCCATAATTATTTTGAATTTAATAAAGGAGAACAGGCTTAGGTTCCTTCATTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAAATGTCTTGCAGCTTCTTGGCAAAGTGGCTGCATATGCATTGACATTAACAAGTTTTTTCTATTGCCAAACGACACCAACCTTGAGACCAGAAGAAAGTCTGAAATGGCAAAGTACAGATTTTACATGCAGCAGTGTTGATGAGGGAACCTTTTCACCTACTAGACATGCCAATGATGATAATGGGGATGCTAATAATTTAGAGAGGAAACCAAGTGAAGGAAACAATGATGCCAATGAAAATCATTCTGTCAAACCACCCATGTTGCAGAGGGGGGTGCTCAGGACCAACTGCATAGACTGCTTGGATCGCACTAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGCCACCAGCTCCATGCTCTGGGAGTTATTGACCACCCAAAAATTGATCTTGATGACCCTGTAGCAGATGATTTGATGGGGTTTTATGAGCGGATGGGTGATACACTCGCACATCAGTATGGTGGTTCTGCTGCTCACAACAAGATTTTCTCTGAGAGGAGGGGCCAGTGGAGAGCTGCAACACAGTCTCAGGAGTTTTTTAGGACTCTTCAACGCTATTATAGCAATGCATACATGGATGCTATGAAACAGGATGCAATCAATGTATTCCTGGGGCATTTTCAGCCACAACAGGGTAAGCCTGCTCTATGGGAGTTGGGTTCAGATCAGCTCTATGATGCAGGAAGACATGGAGATGACGATGCTAGGTCATTTTTCAAAAGATCCTTCTCAGATGGAAACATTCTTAATGAAAGTTCTACACCGATGTCAGCCCCAAAGGCCAAGCATGAAAAATTCCCAAGCCAAGGCGGCTTACCAGATCGATCAGAAGAAGGAAGCAAGGGACTCTGTGAGTCATCACCAGAAATATCTACTACTGAGAGTGACATCTCATTTTCAAGGTACACTCCCTCAATGCCTCGGAGACAGCTCTTTGGAGATATGCAAAGAGAGCGCTGCCTTGAAAGTGAACATATTTACTATTCTGATCACGGGGATTCCTTCAGCTGCTCCAACTTTGTTGACCTGGATTGGCTATCTTCTTCAGGAAATTCATGTGAAGAAGAGCCATTTGAGAGGTCATCAATTACCAACTCTCCAATTGCTGGAGTTTCTTCAGAAAATGTTGTCAATGGAATAATGGTAGGTGAGGCAACTGCCTCCACTAGTGATTGGGGGGCCTCCAGCCTAAAGTATTCTCAGGGAAGGGAACAAACTGAATCCGAGTTATCCTACGGTGATGCACGGTCCAACACACCAGAGGAATTTCCAGATACTTTTGTAAACTGGGTGACTTATGGACAGACACTTTGCCATTGA 2466 0.4213 MASSENEPCHSPSASDQSPSPPSPPSNVCMQKFRLYETRSNFYMIGRDKSRTYWKVLKIDRLDPSELNLREDSTTYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAVSKSEMIPLPNSSVRSNINSKNENRYKRLLCMVDLTKDFFFSYSYHIMRSLQRNMCDDETGHILYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQEMLMISRREFTLTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDVAEGLPIQISSIIQNRGSIPLFWSQETSKLNIKPDIILSKKDQNYQATRLHFENLVKRYGNPIIILNLIKENRLRFLHWDLHKHFQSKATNVLQLLGKVAAYALTLTSFFYCQTTPTLRPEESLKWQSTDFTCSSVDEGTFSPTRHANDDNGDANNLERKPSEGNNDANENHSVKPPMLQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGVIDHPKIDLDDPVADDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAMKQDAINVFLGHFQPQQGKPALWELGSDQLYDAGRHGDDDARSFFKRSFSDGNILNESSTPMSAPKAKHEKFPSQGGLPDRSEEGSKGLCESSPEISTTESDISFSRYTPSMPRRQLFGDMQRERCLESEHIYYSDHGDSFSCSNFVDLDWLSSSGNSCEEEPFERSSITNSPIAGVSSENVVNGIMVGEATASTSDWGASSLKYSQGREQTESELSYGDARSNTPEEFPDTFVNWVTYGQTLCH 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00948 821 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 20 360 - -
Gma13g00948 821 Pfam SacI homology domain 105 380 IPR002013 GO:0016791
Gma13g00948 821 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 358 821 - -
Gma13g00948 821 MobiDBLite consensus disorder prediction 446 461 - -
Gma13g00948 821 MobiDBLite consensus disorder prediction 778 804 - -
Gma13g00948 821 MobiDBLite consensus disorder prediction 1 26 - -
Gma13g00948 821 MobiDBLite consensus disorder prediction 667 683 - -
Gma13g00948 821 ProSiteProfiles Sac phosphatase domain profile. 168 537 IPR002013 GO:0016791
Gma13g00948 821 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 358 821 IPR043573 GO:0043813|GO:0046856
Gma13g00948 821 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 20 360 IPR043573 GO:0043813|GO:0046856
Gma13g00948 821 MobiDBLite consensus disorder prediction 631 683 - -
Gma13g00948 821 MobiDBLite consensus disorder prediction 430 465 - -
Gma13g00948 821 MobiDBLite consensus disorder prediction 778 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00948 Gma-Chr13 23631000 23641077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00948 30 821 Acyl Lipid Metabolism Gene Families AT3G43220 61.482 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00948 K22913 - gmx:100810079 1609.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00948 13 23631000 23641077 Gma04g00531 04 4722892 4742602 ECH
Gma13g00948 13 23631000 23641077 Gma06g00522 06 4432738 4438692 ECH
Gma13g00948 13 23631000 23641077 Gma13g00948 13 23631000 23641077 ECH
Gma17g00424 17 3424398 3433186 Gma13g00948 13 23631000 23641077 GST
Gma13g00948 13 23631000 23641077 Gma15g01706 15 18293998 18309836 PCT
Gma13g00948 13 23631000 23641077 Gma09g00677 09 7974289 7990521 PCT
Gma15g01706 15 18293998 18309836 Gma13g00948 13 23631000 23641077 PCT
Gma09g00677 09 7974289 7990521 Gma13g00948 13 23631000 23641077 PCT