Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00938 ATGATGGGTCACGTTGAAAGTGGAGCTACATGTTTGGTTGCACTTTCACTCGCACTCCACCTTGTATCAGCAACGACCACCTCTTCTTCCTTGGACGTTGGCGCCGTTAGAGTCGTGAGGGTTCGGAGGGACGGCGCGGGAGACTTTAGGACGGTGACGGACGCCGTTAACAGCATTCCGTCGGGGAACAAGCGGCGAGTGGTGGTGTGGATCGGAAGGGGCGTGTATCGCGAGAAGATCACCGTAGACAGGTCGAAACCTTTCGTTACGTTTTATGGAGAAAGGAATGGGAATGACAACGACAACGACAGCAGAGACATCATGCCCATCATAACGTACGACGCCACGGCGTTGCGGTATGGGACAGTGGACAGCGCCACCGTCGCTGTCGACGCCGACTACTTCGTGGCTGTCAATGTGGCATTTGTGAACTCGTCTCCTAGGCCAGAAGAAAACAGTGTTGGTGCACAAGCATTAGCCATGAGGATATCAGGGGACAAGGCTGCATTCTTCAACTGCAAGTTCATTGGATTTCAGGACACTTTATGCGATGATAAAGGCAGACACTTTTTCAAGGACTGCTACATCCAAGGCACCTACGATTTCATCTTTGGAAATGGAAAATCCATCTACTTGAGAAGTACCATAGAATCGGTGGCAAATGGTTTGAGTGTTATCACAGCACAAGGTAGGGAAAGCATGGCAGAAGACACTGGATTCACTTTCCTGCACTGCAACATAACGGGGAGTGGTAACGGGAACACTTACCTAGGGCGTGCCTGGAAGAAGAGCCCTAGGGTGGTATTTGCTTACACTTACATGGGCTCCCTCATCAATACCCAGGGATGGTTCAACAACCAAGTTGCTCATGCCAAATCCAACAACCAGACAATCTACTATGGAGAATATAGGTGCATGGGACCAGGAGCTGTTTCCTCTGGCCGCGTAAAATTTCGGAAGATACTGTCTAAGGAAGAAGCAAAGCCCTTCTTGAGCATGGCTTATATTCATGGAGGAACGTGGGTAGTTCCACCTCCCAAGCTGTGA 1047 0.5024 MMGHVESGATCLVALSLALHLVSATTTSSSLDVGAVRVVRVRRDGAGDFRTVTDAVNSIPSGNKRRVVVWIGRGVYREKITVDRSKPFVTFYGERNGNDNDNDSRDIMPIITYDATALRYGTVDSATVAVDADYFVAVNVAFVNSSPRPEENSVGAQALAMRISGDKAAFFNCKFIGFQDTLCDDKGRHFFKDCYIQGTYDFIFGNGKSIYLRSTIESVANGLSVITAQGRESMAEDTGFTFLHCNITGSGNGNTYLGRAWKKSPRVVFAYTYMGSLINTQGWFNNQVAHAKSNNQTIYYGEYRCMGPGAVSSGRVKFRKILSKEEAKPFLSMAYIHGGTWVVPPPKL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00938 348 Pfam Pectinesterase 40 338 IPR000070 GO:0030599|GO:0042545
Gma13g00938 348 SUPERFAMILY Pectin lyase-like 37 342 IPR011050 -
Gma13g00938 348 Gene3D - 37 345 IPR012334 -
Gma13g00938 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 28 347 - -
Gma13g00938 348 PANTHER PECTINESTERASE 28 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00938 Gma-Chr13 23518123 23521098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00938 35 348 Carbohydrate Esterase AT5G07410 49.682 3.79e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00938 K01051 - gmx:100790786 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00938 13 23518123 23521098 Gma13g00938 13 23518123 23521098 ECH