Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00936 ATGGAAGATGCTGGAGGTTCCAAATTGCATGGAATTAAGCAGATTGTGAGATTGAAGGAAATGTTTCAGAAGTGGCAAACTGTAACTCTGGGCTCAAAAGATTCCAACAATCATTCTGATGTGACTCATCATCATGGGGTCTTATCACCAATGATTAACAAAAGGCTAACTGATATTGTGTATTGTGACTCTGATGAGGATGGCTGCTACAGCCCTCAACCACCACATGATGTTCCCAAAGGGTACTTAGCCGTCTATGTTGGTCCTCAGCTTCGGAGGTTTATCATTCCCACAAGCTACCTTAGCCACTCTTTGTTCAAGGCGTTGCTGGAAAAGGCTGCAGAGGAATTTGGGTTTGATCAGAGTGGTGGACTCACCATTCCATGTGAAATTGAGACCTTTAAATACCTCTTGAATTGCATAGAGAACCATGATGACAGCTCCACTGAAAATACAGGAACTGTGGAAGAATAA 474 0.4283 MEDAGGSKLHGIKQIVRLKEMFQKWQTVTLGSKDSNNHSDVTHHHGVLSPMINKRLTDIVYCDSDEDGCYSPQPPHDVPKGYLAVYVGPQLRRFIIPTSYLSHSLFKALLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCIENHDDSSTENTGTVEE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00936 157 PANTHER SMALL AUXIN-UP RNA-RELATED 7 154 - -
Gma13g00936 157 Pfam Auxin responsive protein 69 141 IPR003676 GO:0009733
Gma13g00936 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 154 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00936 Gma-Chr13 23508758 23509868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00936 1 157 Calmodulin-binding Proteins AT3G43120 66.250 1.11e-75 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00936 K14488 - gmx:100527760 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00936 13 23508758 23509868 Gma13g00936 13 23508758 23509868 ECH
Gma17g00433 17 3528726 3530720 Gma13g00936 13 23508758 23509868 GST
Gma13g00936 13 23508758 23509868 Gma15g01702 15 18191883 18195068 PCT
Gma13g00936 13 23508758 23509868 Gma09g00671 09 7864847 7868688 PCT
Gma15g01702 15 18191883 18195068 Gma13g00936 13 23508758 23509868 PCT
Gma09g00671 09 7864847 7868688 Gma13g00936 13 23508758 23509868 PCT