Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00918 ATGGCCGCTGTTCGCCTCCTTCTCctcctcctcttccctttctcctctctctccctttctGAAAACGAAGCCCTTCTCAACCTCAAGAAATCATTCTCTAACCCCGTAGCTCTCTCTTCCTGGGTTCCCAACCAGAACCCTTGCTCCTCCAGGTGGCTCGGCGTCATCTGCTTCAACAACATCATCAACAGCCTCCACCTCGTCGACCTCTCCCTCTCCGGCGCCATCGATGTCAACGCCCTCACCCAAATCCCCACTCTCCGCTCCATCAGCTTCGTCAACAACTCCTTCTCCGGCCCAATCCCTCCCTTCAACCAACTCGGGGCCCTCAAGTCCCTGTACTTAGCCCACAACCAGTTCTCCGGCCAAATCCCCTCCGATTTCTTCTCGCAATTAGCTTCCTTGAAAAAAATATGGATCTCAAACAACAAGTTCTCCGGCCCCATCCCGTCTTCCTTGACCAACCTTCGCTTCCTCACCGAGCTCCACCTCGAGAACAACGAGTTCTCCGGCCCGGTGCCGGAGCTCAAGCAAGACATAAAATCCTTGGACATGTCGAACAACAAGCTCCAGGGAGAAATCCCCGCCGCCATGTCGAGGTTCGAAGCGAAGTCCTTCGCCAACAACGAAGGACTATGCGGGAAGCCGCTGAATAATGAGTGCGAGGCCGGTGGTAGTTCAGAAGTAGGGTCGGGTTGGGGGATGAAGGTGGTTATTGTCCTCATTGTCGCTGTTGCTTTGGCTTTCATTTTTGCGTTGACGCGGTCGAAGCGTCGACACGACGATGATTTCAGCGTGAtGAGCAGGGATCACGTGGACgAGGTGGTGCAAGTGCACGTGCCGAGCTCGAACCATAGCAGGGGGGCCTCCGAGGGGGGGAGCAAGAAGGAGTCTTCTTCGTCGAAGAAAGGGTCTTCGCGGGGCGGCATGGGTGACCTTGTGATGGTGAACGACGAGAAGGGCGTGTTTGGCTTGCCCGATTTGATGAAGGCTGCGGCGGAGGTTCTCGGGAACGGTGGGTTGGGTTCGGCCTACAAAGCTGCCATGAACAATGGCCTCTCTGTGGTGGTCAAGCGGATGCGCGAGATGAATAAAGTCAGCAGAGACATCTTTGACGCCGAGATGAGACGCTTTGGGAGACTCAGAAACCTTAACATCATTACGCCTCTCGCTTATCATTACCGCAAGGAGGAAAAGCTGTTTGTCACCGAATACATGCCCAAAGGAAGCTTGCTATACGTCTTGCATGGTGACAGAGGATCGAGTCATGCTGACCTGAACTGGCCAATCCGTTTGAATATCGTGAAGGGAATTGCGCGAGGGTTGAACTTTATTTATTCAGAATTTTCCAACGAAGACCTGCCACATGGAAACCTGAAATCCAGCAATGTTCTACTAACTGAAAATTACGAGCCTCTCCTAAGCGATTTCGCCTTTCATCCACTCATCAACCCCAACTACGCCATACAGACAATGTTTGCCTACAAAACACCCGATTACGTATCATACCAGCATGTTTCACAGAAGACCGACGTGTATTGCCTCGGAATCATCGTTCTTGAAATCATCACTGGGAAATTCCCCTCTCAGTATCACAGTAATGGCAAGGGTGGCACTGACGTAGTGCACTGGGTGTTCACTGCGATTTCTGAGAGAAGAGAAGCGGAATTGATTGATCCAGAGTTAATGAGCAATCACTCGAACTCCCTCAATCAAATGTTGCAACTTCTCCAAGTAGGGGCTGCTTGCACGGAGAGCAACCCCGATCAACGACTTAACATGAAGGAAGCCATTAGAAGGATAGAGGAGGTTCAGGTTTAA 1821 0.5085 MAAVRLLLLLLFPFSSLSLSENEALLNLKKSFSNPVALSSWVPNQNPCSSRWLGVICFNNIINSLHLVDLSLSGAIDVNALTQIPTLRSISFVNNSFSGPIPPFNQLGALKSLYLAHNQFSGQIPSDFFSQLASLKKIWISNNKFSGPIPSSLTNLRFLTELHLENNEFSGPVPELKQDIKSLDMSNNKLQGEIPAAMSRFEAKSFANNEGLCGKPLNNECEAGGSSEVGSGWGMKVVIVLIVAVALAFIFALTRSKRRHDDDFSVMSRDHVDEVVQVHVPSSNHSRGASEGGSKKESSSSKKGSSRGGMGDLVMVNDEKGVFGLPDLMKAAAEVLGNGGLGSAYKAAMNNGLSVVVKRMREMNKVSRDIFDAEMRRFGRLRNLNIITPLAYHYRKEEKLFVTEYMPKGSLLYVLHGDRGSSHADLNWPIRLNIVKGIARGLNFIYSEFSNEDLPHGNLKSSNVLLTENYEPLLSDFAFHPLINPNYAIQTMFAYKTPDYVSYQHVSQKTDVYCLGIIVLEIITGKFPSQYHSNGKGGTDVVHWVFTAISERREAELIDPELMSNHSNSLNQMLQLLQVGAACTESNPDQRLNMKEAIRRIEEVQV 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00918 606 Gene3D Ribonuclease Inhibitor 180 218 IPR032675 -
Gma13g00918 606 SUPERFAMILY Protein kinase-like (PK-like) 334 601 IPR011009 -
Gma13g00918 606 Gene3D Transferase(Phosphotransferase) domain 1 407 606 - -
Gma13g00918 606 MobiDBLite consensus disorder prediction 278 312 - -
Gma13g00918 606 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 606 - -
Gma13g00918 606 Gene3D Phosphorylase Kinase; domain 1 336 406 - -
Gma13g00918 606 Pfam Leucine rich repeat 110 168 IPR001611 GO:0005515
Gma13g00918 606 ProSiteProfiles Protein kinase domain profile. 330 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00918 606 Gene3D Ribonuclease Inhibitor 130 177 IPR032675 -
Gma13g00918 606 Gene3D Ribonuclease Inhibitor 20 129 IPR032675 -
Gma13g00918 606 Pfam Leucine rich repeat N-terminal domain 20 57 IPR013210 -
Gma13g00918 606 SUPERFAMILY L domain-like 18 201 - -
Gma13g00918 606 Pfam Protein kinase domain 334 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00918 606 PANTHER LRR RECEPTOR-LIKE KINASE 6 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00918 Gma-Chr13 23326800 23329243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00918 1 606 Receptor kinase-like Gene Family AT3G42880 52.044 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma13g00918 Pkinase 3.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00918 - - gmx:100788667 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00918 13 23326800 23329243 Gma13g00918 13 23326800 23329243 ECH
Gma17g00451 17 3704474 3706915 Gma13g00918 13 23326800 23329243 GST
Gma13g00918 13 23326800 23329243 Gma15g01676 15 17461134 17464031 PCT
Gma15g01676 15 17461134 17464031 Gma13g00918 13 23326800 23329243 PCT