Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00909 ATGGATTCATCAATTTCCCTTTTCTTTCTCCTCCTCCAACTCACAATGCTATCTGCGACCAAGAAGACTTATATAGTGCACATGAAACAACGCCACGATTCCTCCGTGCACCCCACGCAGCGTGACTGGTACGCTGCCACTCTAGATTCTTCTCCAGACTCTCTCCTTTATGCCTACACCGCCTCTTACAACGGCTTCGCTGCCATACTCGACCCTCAAGAAGCCCACGTGCTGCGAGCTTCCGATTCCGTCCTGGGCGTCTACGAGGACACGCGCTACACGCTTCACACCACTCGCACCCCCGAGTTCCTGGGCCTCCAGGCCCATTCCGCCTTCTGGCAAGACCTCCACCAGGCCTCACACGACGTCGTCATAGGTGTCCTCGACACTGGCGTCTGGCCCGAATCGCAAAGCTTCGACGATTCCCAAATGCCTCAAATCCCCACTCGCTGGCGCGGTAACTGCGAGTCCGCACCTGACTTCGACCCTTCTCTCTGTAACAACAAACTCATCGGCGCTCGAAGCTTCTCCAAGGGCTACCGCATGGCCTCTGCTAACGCTAGAAAAAACAGAGAACCTGCTTCGCCGCGTGACCTCGACGGCCACGGCACCCACACCGCCTCCACCGCCGCTGGCTCCGCCGTTTCCAACGCCACGCTCCTCGGCTACGCCACCGGCACGGCCCGCGGGATGGCGCCGCAGGCGCGCGTGGCGGCCTACAAAGTCTGCTGGACCGGCGGCTGCTTCGCCTCCGACATTCTCGCCGGAATGGATCAGGCTATCCAGGACGGCGTCGACGTCCTTTCGCTCTCCCTCGGTGGCTCCTCCTCCTCCGTCCCTTACTACTTCGACAACATCGCCATCGGAGCCTTCGCGGCGCTGGAGAGAGGCATCTTCGTCGCGTGCTCGGCGGGGAACACCGGACCTCGCAGCGGTTCTGTCGCGAATGTCGCTCCGTGGATCATGACTGTCGGCGCCGGCACGCTGGACCGTGATTTTCCGGCGTACGCTACTCTCGGAAACGGAAAACGCTTTGCCGGAGTTTCGCTTTACAGTGGAGAGGGGATGGGAGACGAACCGGTCGGTTTGGTTTATTTCAGCGACCGGTCGAACTCGTCAGGCAGCATTTGCATGCCGGGTTCGCTCGACCCGGACAGCGTGCGCGGGAAGGTGGTGGTTTGTGACAGGGGACTCAACTCGCGCGTGGAGAAGGGTGCAGTGGTGCGCGACGCCGGCGGGGTTGGGATGATACTCGCAAACACGGCGGCGAGTGGCGAGGGACTGGTGGCGGACAGTCACTTGGTGGCCGCCGTGGCGGTGGGGGAATCCGCGGGGGATGAGATCAGAGAGTACGCGTCTTTGGATCCTAATCCAACCGCTGTTCTCAGCTTCGGTGGGACCGTGTTAAACGTGAGGCCCTCGCCAGTGGTGGCAGCATTCAGCTCTCGCGGGCCCAATGGAGTCACGGCCCAAATACTAAAACCCGATGTTATTGGGCCTGGAGTGAACATCTTAGCGGGATGGTCTGGTGCCGTTGGCCCATCTGGGTCCCAAGACACTCGCAAAACTGGCTTTAACATCATGTCTGGAACTTCCATGTCTTGTCCCCACATAAGTGGTTTGGCTGCGTTGTTGAAAGCTGCGCATCCAGATTGGAGTCCAAGTGCTATCAAATCTGCACTAATGACAACGGCTTATACCTATGACAACACAGAGTCTCCACTTCGTGATGCAACGGGCGAAGAATCCCTCTCCACACCATGGGCCTATGGGGCCGGTCATGTCAACCCACAAAAGGCCCTATCTCCTGGGCTTCTTTATGATGCCTCCACCCAAGACTACATTTACTTTTTGTGCTCCTTGAACTACACCCTCGACCATCTTAGACTCCTTGTGAAGCATCCTGATGCCAATTGTTCTAAAAAATTTGCTGACCCTGGCGACCTCAACTATCCATCCTTCTCGGTTGTTTTCGGAAGCAACAAGGTTGTTCGATACACGCGCACGTTGACCAACGTGGGGGAACCGGGATCCGCGTATGACGTGGCGGTGAGCGCGCCATCCACCGTGGACATAACGGTGAATCCAAATAAGCTTGAGTTTGGAGAAGTAGGGGAAAGGCAAACGTACACGGTGACATTTGTGTCGAATAGGAGTGTTAATGATTCCGCTACGTCTGGTTTTGGTAGCATTATGTGGAGCAATGAACAACACCAAGTTAGGAGCCCGGTTGCATTTACATGGACCTATTTTTGA 2256 0.5709 MDSSISLFFLLLQLTMLSATKKTYIVHMKQRHDSSVHPTQRDWYAATLDSSPDSLLYAYTASYNGFAAILDPQEAHVLRASDSVLGVYEDTRYTLHTTRTPEFLGLQAHSAFWQDLHQASHDVVIGVLDTGVWPESQSFDDSQMPQIPTRWRGNCESAPDFDPSLCNNKLIGARSFSKGYRMASANARKNREPASPRDLDGHGTHTASTAAGSAVSNATLLGYATGTARGMAPQARVAAYKVCWTGGCFASDILAGMDQAIQDGVDVLSLSLGGSSSSVPYYFDNIAIGAFAALERGIFVACSAGNTGPRSGSVANVAPWIMTVGAGTLDRDFPAYATLGNGKRFAGVSLYSGEGMGDEPVGLVYFSDRSNSSGSICMPGSLDPDSVRGKVVVCDRGLNSRVEKGAVVRDAGGVGMILANTAASGEGLVADSHLVAAVAVGESAGDEIREYASLDPNPTAVLSFGGTVLNVRPSPVVAAFSSRGPNGVTAQILKPDVIGPGVNILAGWSGAVGPSGSQDTRKTGFNIMSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTTAYTYDNTESPLRDATGEESLSTPWAYGAGHVNPQKALSPGLLYDASTQDYIYFLCSLNYTLDHLRLLVKHPDANCSKKFADPGDLNYPSFSVVFGSNKVVRYTRTLTNVGEPGSAYDVAVSAPSTVDITVNPNKLEFGEVGERQTYTVTFVSNRSVNDSATSGFGSIMWSNEQHQVRSPVAFTWTYF 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00909 751 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Gma13g00909 751 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 748 IPR045051 -
Gma13g00909 751 Pfam PA domain 385 448 IPR003137 -
Gma13g00909 751 MobiDBLite consensus disorder prediction 184 209 - -
Gma13g00909 751 Gene3D Peptidase S8/S53 domain 122 614 IPR036852 GO:0004252|GO:0006508
Gma13g00909 751 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 96 IPR037045 -
Gma13g00909 751 CDD Peptidases_S8_3 93 566 IPR034197 -
Gma13g00909 751 Pfam Fibronectin type-III domain 648 745 IPR041469 -
Gma13g00909 751 Gene3D - 618 748 - -
Gma13g00909 751 PRINTS Subtilisin serine protease family (S8) signature 120 139 IPR015500 -
Gma13g00909 751 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Gma13g00909 751 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Gma13g00909 751 Pfam Subtilase family 121 570 IPR000209 GO:0006508|GO:0008236
Gma13g00909 751 Gene3D - 330 469 - -
Gma13g00909 751 ProSiteProfiles Serine proteases, subtilase domain profile. 92 601 - -
Gma13g00909 751 SUPERFAMILY Subtilisin-like 95 605 IPR036852 GO:0004252|GO:0006508
Gma13g00909 751 SUPERFAMILY Protease propeptides/inhibitors 22 94 - -
Gma13g00909 751 PANTHER CUCUMISIN-RELATED 14 748 - -
Gma13g00909 751 Pfam Peptidase inhibitor I9 23 96 IPR010259 -
Gma13g00909 751 CDD PA_subtilisin_like 336 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00909 Gma-Chr13 23254112 23256367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00909 7 751 Subtilisin-like Serine Gene Family AT2G05920 66.088 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00909 - - gmx:100786523 1463.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00909 13 23254112 23256367 Gma13g00909 13 23254112 23256367 ECH
Gma17g00459 17 3768171 3770432 Gma13g00909 13 23254112 23256367 GST
Gma13g00909 13 23254112 23256367 Gma09g00641 09 7287039 7289822 PCT
Gma09g00641 09 7287039 7289822 Gma13g00909 13 23254112 23256367 PCT