Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00831 ATGACAATATTGACCAACACGGTTCAACCAGAATGCTTGCTTCTGTCCCCAAGAATGCCTCGAAGAATACTCCGAGGACCAATGGAGTTCATTAGTGGGAACCTTCGGACATTTAGCTACTTTGACTTCCGGACATTGAGGAGAGCCACCAAGAATTTCCATCCTCGAAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCAGggaaagttggcagatggaagacttaagtcaagacattCACGGGGATTGCAATACCTTCACGAGGATTCACTTTTAAGAATTGTTCACCGAGACATCAAAGCGAGCAACATTCTTCTTGATGAAAAGTTTCAGCCTAGGATTGGAGACTTTGGGCTAGCTAGGTTCTTCCCTGAAGACCAAGCTTACCTTAGCACTCAGTTCGCAGGAACATTAGGTTATACAGCTCCCGAGTATGCCATTAGAGGAGAATTGTCTGAAAAGGCAGACATCTATTGTTTTGGAGTTCTTGTGCTTGAAATCATCAGTTGTAGGAAAAATACTTTACCATCAGAACAGCAGTACCTACCCGAATATGCATGGAAACTTTATGAGAAGTCAATGTTGGTAGAGATTGTGAATCCAAAACTGCGGGAACATGGCATAGAAGAAAAGGATGTCATGCAAACATTCCACGTGGCCTTGTTATGCCTTTAG 681 0.4112 MTILTNTVQPECLLLSPRMPRRILRGPMEFISGNLRTFSYFDFRTLRRATKNFHPRNLLGSGGFGPVYQGKLADGRLKSRHSRGLQYLHEDSLLRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYCFGVLVLEIISCRKNTLPSEQQYLPEYAWKLYEKSMLVEIVNPKLREHGIEEKDVMQTFHVALLCL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00831 226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672|GO:0006468
Gma13g00831 226 Gene3D Phosphorylase Kinase; domain 1 26 80 - -
Gma13g00831 226 PANTHER RECEPTOR-LIKE KINASE 34 71 - -
Gma13g00831 226 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 71 - -
Gma13g00831 226 SUPERFAMILY Protein kinase-like (PK-like) 39 180 IPR011009 -
Gma13g00831 226 SMART serkin_6 53 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00831 226 Pfam Protein kinase domain 82 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00831 226 PANTHER RECEPTOR-LIKE KINASE 82 226 - -
Gma13g00831 226 Gene3D Transferase(Phosphotransferase) domain 1 81 226 - -
Gma13g00831 226 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00831 226 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 82 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00831 Gma-Chr13 22600673 22603817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00831 82 225 Receptor kinase-like Gene Family AT1G56120 50.340 4.41e-46 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g00831 Pkinase 1.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00831 - - ccaj:109792436 272.322