Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00824 ATGGGGAATTGTTGGAGTCATCAATCAGGTTCTCCAGGCGATCACCGCAACTCCAATACTGCCCCCAACCCCAACAATCAATCAGGGAGTATTCAGTTTTCTGCTGGTCTCAGCAACACAAGATTAATACAGAATGGCAATTCTACTTCTCTTGGGCGTAGCAGCCACTCTGGAGGAATCAGCAGGTTCTTTGGGCCAAGTAGTAGTAATAACTACTCAACAGGAAATAATACTAGCACATCCCTTTGGGGCTCTGAGACTAGCCAAGCCTCTCGAGTGAGAGATGAAGAGGAGTTTCCTCATGGGCAGATCTTGGATGTTGCAGACTTGAGAGCATTTACACTGGCCGAATTGAAGGCAGCCACCAAAAATTTCAGAGCTGAGACTGTGCTAGGAAAGGGGGGCTTTGGTACAGTATTCAAGGGCTTGATTGAGGATAGAGCAGCAAAGAAAAGAGGAGAGGGGTTGACTATTGCCATCAAGAAATTGAATTCTGGAAGCAGCCAAGGAATTGCAGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCACCCCAATCTTGTTAAGTTGTTGGGATTTGGGCGAGAGAATAGTGAACTTTTCCTGGTGTATGAATTTATGCATCGTGGCAGCTTGGATAACCACCTATTTGGAAGAGGAGCAAATGTTCGGCCACTTTCTTGGGACACAAGGCTAAAGGTTATGATTGGAGCAGCAAGGGGACTGAATTTCCTACACTCCTTGGAGGAAAAAATTATATATAGAGATTTTAAACCCTCAAATATATTACTTGACACGACATATACGGCTAAGTTATCAGACTTTGGCTTAGCCAGATCTGTCAATTCTCCTGATCAAACTCACGTTACGACACAGGTTGTGGGAACGCATGGCTATGCTGCTCCCGAGTACATTTTTACTGGTCATTTGTACGTAAAAAGTGACGTGTATGGATTTGGAATTGTTTTGTTGGAGGTGCTGACTGGCAAGAGGATCAGTGGTATAATGTTCCTGTGTGAGCAAACGTCCTTGAGTGATTGGCTCAAATCAAATCTTCTAAATAGAGGGAAAATAAGAAGCACTATGGATGCAAAGTTGGAAGGTAAGTATCCATCCAACTTAGCTTTACAGTTAGCTCAACTTGCTCTTAAATGCATCCAAGCAGAGCCCAAAGTCAGGCCATCAATGAAAGAAGTTGTTGAAACATTGGAACATATTGAAGCAGCTAATGAGAAACCAGCTGATAACACTCATAACAGAAAACGGGTTAATCTTTCCCGGGTAGTTCAACAACATGGCCGGCCAGAAGGTGGTTAA 1323 0.4369 MGNCWSHQSGSPGDHRNSNTAPNPNNQSGSIQFSAGLSNTRLIQNGNSTSLGRSSHSGGISRFFGPSSSNNYSTGNNTSTSLWGSETSQASRVRDEEEFPHGQILDVADLRAFTLAELKAATKNFRAETVLGKGGFGTVFKGLIEDRAAKKRGEGLTIAIKKLNSGSSQGIAEWQSEVNFLGRLSHPNLVKLLGFGRENSELFLVYEFMHRGSLDNHLFGRGANVRPLSWDTRLKVMIGAARGLNFLHSLEEKIIYRDFKPSNILLDTTYTAKLSDFGLARSVNSPDQTHVTTQVVGTHGYAAPEYIFTGHLYVKSDVYGFGIVLLEVLTGKRISGIMFLCEQTSLSDWLKSNLLNRGKIRSTMDAKLEGKYPSNLALQLAQLALKCIQAEPKVRPSMKEVVETLEHIEAANEKPADNTHNRKRVNLSRVVQQHGRPEGG 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00824 440 ProSiteProfiles Protein kinase domain profile. 125 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00824 440 MobiDBLite consensus disorder prediction 1 32 - -
Gma13g00824 440 Gene3D Transferase(Phosphotransferase) domain 1 209 434 - -
Gma13g00824 440 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 12 440 - -
Gma13g00824 440 MobiDBLite consensus disorder prediction 65 89 - -
Gma13g00824 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Gma13g00824 440 Gene3D Phosphorylase Kinase; domain 1 85 208 - -
Gma13g00824 440 PANTHER OS01G0588500 PROTEIN-RELATED 12 440 - -
Gma13g00824 440 ProSitePatterns Protein kinases ATP-binding region signature. 131 162 IPR017441 GO:0005524
Gma13g00824 440 SUPERFAMILY Protein kinase-like (PK-like) 106 405 IPR011009 -
Gma13g00824 440 Pfam Protein tyrosine and serine/threonine kinase 128 405 IPR001245 GO:0004672|GO:0006468
Gma13g00824 440 MobiDBLite consensus disorder prediction 65 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00824 Gma-Chr13 22547622 22550556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00824 102 426 Receptor kinase-like Gene Family AT4G02010 42.424 9.56e-83 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma13g00824 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00824 - - gmx:100813304 855.899