Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00822 ATGACAGTAGATCTGGTAGGTGCTGCCAAGATGGGGATGGAGGAGAATATAGCGATACAAGAAGCTGCTTCCGCTGGGTTGAAGAGTATGGAGCATCTGATTCGTGTGCTTTCTTCTCAAATCCCTTCTTCTGCTTCGTCTTCTTCTAACGCACACCACCACCGTCTTAATCTCAACCACCTTGACTGCACCGAAATCACCGACTTCACTGTCTCCAAGTTCAAACAAGTCATCAACTTGTTGAATCGCACGGGACACGCTCGCTTTCGTAGCGCACCTTCTCATCCTTCTCCTTCTACTTCTCTTCCTTCTCAACCTCAACCTCAACCACAACCACAACCATATGCACTGACTCTTGATTTCGCAAAACCTGTTATGCTTAAGTCAAATCCCAACCCTAACCCTTCTTCTACCGATTTGTCGGTTTCTCAATATTCTAAGACCAAGGACACCACCACCTTTAGTATATCTCCTCCCGTGTCCACCACCACCTCCTCATTCATGTCCTCCATCACCGCCGACGGAAGTGTCTCCGACGGAAAGATCGGCCCCGCCATCATCGCTGCCGGCAAGCCTCCTCTCTCCTCATCCCACCGGAAAAGGTGTCACGACGCCACCCTCTCTGCCGGAAAAGCCTCTTCCTCCGCTCACTGCCATTGCTCCAAGAGAAGAAAATCTCGTGTGAAACGAATGATACGTGTGCCGGCGATAAGTTCGAAGATTGCCGATATCCCAGTGGACGAGTACTCATGGCGAAAGTATGGTCAAAAACCAATCAAAGGTTCACCTTACCCGCGAGGGTATTACAAGTGCAGTAGCGTGAGAGGGTGTCCGGCGAGGAAGCACGTTGAGCGAGCCCAGGATGACCCCAACATGCTCATCGTTACCTACGAGGGAGAGCACCGTCATCCGCAACCGCGTCTGCCGGAAACTGCTGCCGGCGCCGGCGGGACTTTTGCCGCTCATCCTGTTTAA 975 0.519 MTVDLVGAAKMGMEENIAIQEAASAGLKSMEHLIRVLSSQIPSSASSSSNAHHHRLNLNHLDCTEITDFTVSKFKQVINLLNRTGHARFRSAPSHPSPSTSLPSQPQPQPQPQPYALTLDFAKPVMLKSNPNPNPSSTDLSVSQYSKTKDTTTFSISPPVSTTTSSFMSSITADGSVSDGKIGPAIIAAGKPPLSSSHRKRCHDATLSAGKASSSAHCHCSKRRKSRVKRMIRVPAISSKIADIPVDEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERAQDDPNMLIVTYEGEHRHPQPRLPETAAGAGGTFAAHPV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00822 324 MobiDBLite consensus disorder prediction 125 144 - -
Gma13g00822 324 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 307 IPR044810 GO:0003700
Gma13g00822 324 Gene3D WRKY domain 231 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma13g00822 324 Pfam Plant zinc cluster domain 199 243 IPR018872 -
Gma13g00822 324 MobiDBLite consensus disorder prediction 301 324 - -
Gma13g00822 324 MobiDBLite consensus disorder prediction 129 144 - -
Gma13g00822 324 SUPERFAMILY WRKY DNA-binding domain 244 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma13g00822 324 Pfam WRKY DNA -binding domain 247 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma13g00822 324 MobiDBLite consensus disorder prediction 99 113 - -
Gma13g00822 324 MobiDBLite consensus disorder prediction 88 115 - -
Gma13g00822 324 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma13g00822 324 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 9 307 - -
Gma13g00822 324 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00822 Gma-Chr13 22527082 22528331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00822 1 310 WRKY Transcription Factor Family AT2G24570 48.225 5.62e-91 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma13g00822 WRKY 2.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00822 - - gmx:732587 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00822 13 22527082 22528331 Gma13g00822 13 22527082 22528331 ECH
Gma17g00539 17 4422176 4424101 Gma13g00822 13 22527082 22528331 GST
Gma01g01920 01 54730036 54732795 Gma13g00822 13 22527082 22528331 PCT
Gma11g00485 11 4054124 4055815 Gma13g00822 13 22527082 22528331 PCT
Gma13g00822 13 22527082 22528331 Gma15g01567 15 15129199 15130879 PCT
Gma13g00822 13 22527082 22528331 Gma09g00559 09 6000550 6002307 PCT
Gma15g01567 15 15129199 15130879 Gma13g00822 13 22527082 22528331 PCT
Gma09g00559 09 6000550 6002307 Gma13g00822 13 22527082 22528331 PCT