Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00803 ATGAGATTGTTGGAGTTTGGGTGTGTGTTGATTGTTCTATCTGCATTTCTGGGTTGTGGGGATGCCGAGGTTTACATAGTAACTGTTGAAGGTGAGCCTATCATAAGTTATACTGGAGGTATTGATGGGTTTGAAGCTACTGCTGTGGAATCCGATGAGGAGATTGATACCGCAAGTGAATTGGTTTCTTCTTATGCTCGCCATCTTGAGAAAAAACATGACATGCTGCTGGGGTTGCTGTTTGAGGAAGGGACATACCAGAAACTCTATAGCTATCGACATCTTATTAATGGGTTTGCTGTTCATATTTCACCAGAACAGGCAGAAACTCTAAGACATGCTCCTGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAGGAGACTTACAACACATACCCCACAATTTTTAGGGCTTCCAACTGGGGTTTGGCCAACAGGAGGTGGCTTTGATCGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCAGGGATCTATCCTCATCACCCAAGTTTTGCAGCTCATAATGCTGAGCCATATGGGCCAGTTCCAAAGTATAGAGGAAAATGTGAAGCTGATCCAGATACTAAAAGAAGTTACTGTAATGGGAAGATTGTTGGAGCACAACACTTTGCTCATGCTGCAATAGCTGCTGGGGCATTTAACCCTTCAATTGACTTTGCATCTCCTCTCGATGGGGATGGACATGGAAGTCATACAGCCTCTATTGCGGCTGGAAATAATGGAATTCCTGTGAGAATGCATGGCCACGAATTTGGGAGAGCGAGTGGGATGGCTCCTCGTGCTAGGATTGCTGTGTACAAGGCACTCTATAGACTGTTTGGAGGGTTTGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTGTATGATGGAGTGGATATACTCAGCCTTTCAGTTGGACCCAACAGTCCTCCAGCAGCTACCAAGACTACGTTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCCGTGAAAGCTGGTGTCTTTGTTGCACAGGCTGCAGGAAATGGTGGTCCTTTTCCTAAGACATTGGTTTCATATAGTCCATGGATAGCATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAATCATTTGATCCTTGGAAATGGAAAAACCTTAGCTGGAATTGGGTTATCACCTTCCACGCATTTAAACGAAACATACACATTGGTTGCCGCAAATGATGTGTTGCTAGATTCTTCAGTTATGAAGTATAGCCCCACGGATTGCCAGAGACCAGAACTTTTAAACAAGAACTTGATAAAGGGTAATATTCTTCTTTGTGGATATTCCTTCAACTTTGTTGTTGGCTCTGCATCAATCAAGAAAGTCTCAGAAACAGCAAAGGCCCTTGGTGCAGTTGGATTTGTTCTTTGTGTTGAAAACAATTCCCCAGGAACAAAATTTGATCCAGTCCCTGTTGGTCTTCCTGGGATTCTCATCACAGATGTCAGCAATTCTAAGGAACTTATAGATTATTATAATATCACTACACCAAGAGACTGGACTGGGCGGGTAAAGAGTTTCGAAGGTAAAGGTAAAATCGGTGATGGTTTGATGCCTATTCTGCATAAATCTGCCCCACAGGTAGCATTATTCTCTGCTCGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTGTCCAAATGGAACTGATGAGCCAAATTATGTTGGTGAGGGGTTTGCCATGATATCTGGAACTAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTCATAAAGCAGAAGCATCCTCATTGGAGCCCTGCGGCCATTAAATCAGCTTTGATGACAACATCAACAACTCTAGACAGAGCAGGGAATCCTCTTCTAGCCCAGCAAACTTCTGAATCAGAAGCTATGAGGCTGGTCAAAGCTACTCCTTTTGATTATGGGAGTGGACATGTTGATCCAACAGCTGCATTGGACCCTGGGCTCATCTTCGATGCAGGATACAAGGATTATGTAGGCTTCTTGTGCACAACACCCAGCATTGATGTTCATGAGATAAGGCACTACACTCATACACCATGTAACACCACCATGGGAAAACCATCAAATTTAAACACCCCATCAATCACAATTTCCTATCTTGTGAGAACTCAAGTTGTCACGCGCACTGTCACAAATGTTGCCGAGGAGGAAACCTATGTGATCACAGCCAGAATGGAACCTGCTGTTGCCATTGAAGTCAACCCTCCAGCAATGACTATCAAAGCGGGCGCATCGCGTCAGTTTTCGGTGTCACTTACAGTGCGCTCAGTGACAAGAAGGTATAGTTTTGGAGAGGTTTTGATGAAAGGGAGCAGAGGGCACAAGGTGAGGATTCCTGTTCTGGCCAATGGACACCGACGATAG 2454 0.445 MRLLEFGCVLIVLSAFLGCGDAEVYIVTVEGEPIISYTGGIDGFEATAVESDEEIDTASELVSSYARHLEKKHDMLLGLLFEEGTYQKLYSYRHLINGFAVHISPEQAETLRHAPGVKSVERDWKVRRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFAAHNAEPYGPVPKYRGKCEADPDTKRSYCNGKIVGAQHFAHAAIAAGAFNPSIDFASPLDGDGHGSHTASIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVYDGVDILSLSVGPNSPPAATKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLILGNGKTLAGIGLSPSTHLNETYTLVAANDVLLDSSVMKYSPTDCQRPELLNKNLIKGNILLCGYSFNFVVGSASIKKVSETAKALGAVGFVLCVENNSPGTKFDPVPVGLPGILITDVSNSKELIDYYNITTPRDWTGRVKSFEGKGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWCPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPLLAQQTSESEAMRLVKATPFDYGSGHVDPTAALDPGLIFDAGYKDYVGFLCTTPSIDVHEIRHYTHTPCNTTMGKPSNLNTPSITISYLVRTQVVTRTVTNVAEEETYVITARMEPAVAIEVNPPAMTIKAGASRQFSVSLTVRSVTRRYSFGEVLMKGSRGHKVRIPVLANGHRR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00803 817 PANTHER CUCUMISIN-RELATED 14 815 - -
Gma13g00803 817 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Gma13g00803 817 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Gma13g00803 817 PRINTS Subtilisin serine protease family (S8) signature 596 612 IPR015500 -
Gma13g00803 817 SUPERFAMILY Subtilisin-like 129 678 IPR036852 GO:0004252|GO:0006508
Gma13g00803 817 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 159 170 IPR023827 -
Gma13g00803 817 CDD PA_subtilisin_like 376 514 - -
Gma13g00803 817 SUPERFAMILY Protease propeptides/inhibitors 86 127 - -
Gma13g00803 817 Gene3D - 369 534 - -
Gma13g00803 817 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gma13g00803 817 Pfam Peptidase inhibitor I9 24 127 IPR010259 -
Gma13g00803 817 Gene3D Peptidase S8/S53 domain 156 687 IPR036852 GO:0004252|GO:0006508
Gma13g00803 817 CDD Peptidases_S8_3 130 633 IPR034197 -
Gma13g00803 817 ProSitePatterns Serine proteases, subtilase family, serine active site. 597 607 IPR023828 -
Gma13g00803 817 ProSiteProfiles Serine proteases, subtilase domain profile. 123 674 - -
Gma13g00803 817 Pfam Subtilase family 154 638 IPR000209 GO:0006508|GO:0008236
Gma13g00803 817 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 815 IPR045051 -
Gma13g00803 817 Gene3D - 691 814 - -
Gma13g00803 817 Pfam Fibronectin type-III domain 719 811 IPR041469 -
Gma13g00803 817 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 128 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00803 Gma-Chr13 22333878 22339864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00803 4 817 Subtilisin-like Serine Gene Family AT4G30020 80.416 0.0 1356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00803 - - gmx:100787619 1615.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00803 13 22333878 22339864 Gma13g00803 13 22333878 22339864 ECH
Gma13g00803 13 22333878 22339864 Gma15g01537 15 14490326 14495676 PCT
Gma13g00803 13 22333878 22339864 Gma09g00534 09 5554186 5560979 PCT
Gma15g01537 15 14490326 14495676 Gma13g00803 13 22333878 22339864 PCT
Gma09g00534 09 5554186 5560979 Gma13g00803 13 22333878 22339864 PCT