Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00792 ATGGATACGCAGATCGTAGATGCTCTGGCCAAGAAAGGGATTGCGAAGCTCTTCCCCATTCAGTTTTTTATTATGCCATCAGGGGACAGAGATGGTTATATGAGTGATCCTGGGCATGATCTAAATGAAAGGGGTTCTGTTTCTTCCTTAAATGCACATAGGGAGTCTGTTTTTGGGGCGCCCTCTAGGGACTGGGAAGACTCAGACCATACTTGGGATTCTAAGTACACCATTTTGCATGCTACTCCTACAAGAATGCATTCAAAGGGAGTTGTACTTGCCTGCAGCCCAATAGATGCAGCCTTGGTGGCTACTGCAGGCAGTGATGACAGACGATTTCTCAGGAAGATTGGCCTAGGGGATTGGGCTTTTGAGCTTCAAGATTCTATGGAGGCTGGTAAGAAGTCCCTGGAAAAAGCTACTGAGCGTGTGAGATGCCTTGAGGATGATTTAGCAAAGTCTAGGGGAAAAGTAACACACGTCCCCATTATCTACTTCTACCGTACTCCCTCACAAAACTCGCTCACCCAACATAACAACGCCATTAATATTGCTTCCAACTCGAAAGACTCATTAAGCCGAGCCCTAGTGCCGTTTTATCCACTAGCTGGTCGTTTACATTGGATAAACAATGGCCGTTTAGAGCTTGATTGCAACGCAATGGGGATTCAGTTCATCTCATCAACCCTAGAAGATAATCTCGGTGATTTTTCACCTTCTTCAGAATACAACTACCTTGTCCCCACTGCAGACTACACCCTCCCAATTCACGACTTGCCCTTGGTTTTAGTTCAGCTAACGAGGTTCAAGTGTGGTGGCGTTAGCATTGCCATAACATTTTCACACGCGGTTGTGGATGGACCCAGTGCGTTACACTTCATGTGTGAGTGGGCAAGGCTTGCAAGCGGCGAGCCAATGCAAACGGTGCCGTTTCATGATCGAAAAGTGTTGCGCGCCAGGGAGCCACCTTCGGTGCCAACAACAGAGTGTCACGCTCACACGGAGTTCGATGAGCCTCCCTTGTTGCTCGGCCAAATCGAGAGCACAGAGGGAAGGAAGAAGAAGACCGCAATGGTTATCGATCCTGAAACTGAGCAGAACACAAGTTGA 1110 0.4793 MDTQIVDALAKKGIAKLFPIQFFIMPSGDRDGYMSDPGHDLNERGSVSSLNAHRESVFGAPSRDWEDSDHTWDSKYTILHATPTRMHSKGVVLACSPIDAALVATAGSDDRRFLRKIGLGDWAFELQDSMEAGKKSLEKATERVRCLEDDLAKSRGKVTHVPIIYFYRTPSQNSLTQHNNAINIASNSKDSLSRALVPFYPLAGRLHWINNGRLELDCNAMGIQFISSTLEDNLGDFSPSSEYNYLVPTADYTLPIHDLPLVLVQLTRFKCGGVSIAITFSHAVVDGPSALHFMCEWARLASGEPMQTVPFHDRKVLRAREPPSVPTTECHAHTEFDEPPLLLGQIESTEGRKKKTAMVIDPETEQNTS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00792 369 MobiDBLite consensus disorder prediction 341 369 - -
Gma13g00792 369 Coils Coil 130 157 - -
Gma13g00792 369 Pfam Transferase family 159 359 - -
Gma13g00792 369 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 153 359 - -
Gma13g00792 369 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 153 359 - -
Gma13g00792 369 Gene3D - 148 337 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00792 Gma-Chr13 22173567 22182539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00792 160 360 Monolignol Biosynthesis Gene Families AT5G48930 36.765 5.02e-40 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00792 K13065 - gmx:100777532 327.405