Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00788 ATGGAAACTCCTAAATTTGTCTTCTTGTCTTTGCTTCTTCTCCTTACTAGTGCTACTATAAGCTCAGCTCAACTAAGTCGTGTCTTCTACAGGAACACATGCCCCAATGTGGAGCAGTTGGTTCGCTCTTCTGTTGCACAGAAATTCCAACAGACTTTTGTGACTGCTCCTGCCACTCTTAGACTCTTCTTCCATGATTGCTTTGTGAGGGGTTGTGATGCTTCGATTTTGCTTGCAAATGGTAAGCCAGAGAAGGATCATCCTGATCAAATTTCTCTAGCTGGTGATGGCTTTGACACAGTGATTAAAGCCAAGGAAGCTGTTGATAGAGACCCTAAGTGCCGTAACAAAGTCTCTTGTGCTGACATACTCGCTCTGGCTACTAGGGATGTCGTCAATTTGGCTGGTGGACCATTTTATAATGTTGAATTGGGAAGGCGTGACGGGAGAATATCTACTATTGCCAGCGTTCAACGCCATCTTCCTCACCCTGATTTCAATTTGGATCAGCTCAATTCCATGTTTAATTTTAATGGCCTATCCCAGACAGATATGATTGCATTATCAGGTGCGCATACAATTGGGTTCTCTCACTGCAACAAATTCTCGAATCGAATCTACAAATTCAGCCCTAGAAACAGAATCGACCCAACACTGAATTTACAATATGCTTTTCAACTTAGGCAAATGTGCCCCTTAAGGGTTGATCCTAGAATTGCCATAAACATGGACCCTGTCACGCCTCAAAAGTTTGACAACCAATACTTCAAGAATCTGCAGCAAGGAAAGGGTCTCTTCACTTCTGACCAGGTGCTGTTTACAGATGCAAGGTCAAAGGCCACAGTCAACTTATTTGCATCAAATGAAGGAGCATTTCAGAAAGCTTTTGTTGATGCTATTACTAAGTTGGGAAGGGTTGGTGTTAAAACTGGAAATCAAGGTGAAATTAGGTTTGATTGCACCAGGCCCAACTAG 975 0.4277 METPKFVFLSLLLLLTSATISSAQLSRVFYRNTCPNVEQLVRSSVAQKFQQTFVTAPATLRLFFHDCFVRGCDASILLANGKPEKDHPDQISLAGDGFDTVIKAKEAVDRDPKCRNKVSCADILALATRDVVNLAGGPFYNVELGRRDGRISTIASVQRHLPHPDFNLDQLNSMFNFNGLSQTDMIALSGAHTIGFSHCNKFSNRIYKFSPRNRIDPTLNLQYAFQLRQMCPLRVDPRIAINMDPVTPQKFDNQYFKNLQQGKGLFTSDQVLFTDARSKATVNLFASNEGAFQKAFVDAITKLGRVGVKTGNQGEIRFDCTRPN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00788 324 Pfam Peroxidase 41 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 Gene3D - 29 324 - -
Gma13g00788 324 PANTHER PEROXIDASE 16-RELATED 1 324 - -
Gma13g00788 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Gma13g00788 324 Gene3D Peroxidase, domain 2 162 303 - -
Gma13g00788 324 CDD secretory_peroxidase 24 322 IPR033905 GO:0004601|GO:0042744
Gma13g00788 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PANTHER - 1 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Gma13g00788 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g00788 324 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00788 Gma-Chr13 22141678 22143613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00788 6 324 Peroxidase AT2G18980 74.295 3.86e-175 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00788 K00430 - gmx:100804620 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00577 17 4781388 4783665 Gma13g00788 13 22141678 22143613 GST
Gma01g01955 01 54997909 54999938 Gma13g00788 13 22141678 22143613 PCT
Gma11g00451 11 3772613 3774944 Gma13g00788 13 22141678 22143613 PCT
Gma13g00788 13 22141678 22143613 Gma15g01521 15 14203122 14212954 PCT
Gma13g00788 13 22141678 22143613 Gma09g00511 09 5281780 5285182 PCT
Gma15g01521 15 14203122 14212954 Gma13g00788 13 22141678 22143613 PCT
Gma09g00511 09 5281780 5285182 Gma13g00788 13 22141678 22143613 PCT