Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00784 ATGGCAGCTGACAAGGCAGCAATCAGCCTCGAGGAAATCAAGAATGAGACCGTTGATCTGGAACGCATTCCTATTGAGGAAGTGTTTCAGCAATTGAAATGTACCAGAGAAGGATTGTCCTCGGACGAAGGAGCCAATCGGCTTCAAATATTTGGGCCAAACAAGCTAGAGGAGAAAAAGGAAAGTAAATTTCTCAAGTTTCTTGGGTTCATGTGGAATCCTCTGTCATGGGTCATGGAAGCTGCAGCTGTTATGGCAATTGCTCTTGCAAATGGGGATGGGAAGCCCCCAGATTGGCAAGATTTTGTGGGTATTGTTTGCTTGTTGGTGATCAACTCCACCATCAGTTTCATTGAAGAAAATAATGCTGGTAATGCAGCTGCTGCTCTTATGGCTGGTCTTGCTCCCAAGACAAAGGTCCTTAGAGATGGTAAATGGACTGAGGAAGAAGCGGCTATTCTAGTTCCTGGAGACATCATAAGCATCAAACTAGGAGATATCATTCCTGCTGATGCTCGTCTTCTTGAGGGTGATCCTTTGAAGGTTGATCAATCCGCTTTGACAGGAGAGTCACTTCCTGTAACCAGGGGTCCTGGAGAAGAAGTTTTCTCTGGCTCAACTTGTAAACAAGGTGAAATTGAAGCTGTTGTCATTGCAACTGGTGTCCACACATTTTTCGGCAAAGCAGCTCACCTGGTGGATAGTACCAACCAAGTTGGACATTTCCAGAAAGTGCTTACAGCAATTGGAAACTTCTGTATTTGTTCCATTGCAGTTGGTATGTTGGCTGAGATCATAGTCATGTACCCAATTCAGCACCGTAAGTACAGAGATGGAATTGACAACCTTTTGGTCCTCTTGATTGGAGGAATTCCCATTGCTATGCCCACTGTGTTGTCTGTGACAATGGCCATTGGTTCTCATAGGCTCTCTCAGCAGGGTGCTATAACCAAGAGAATGACTGCCATTGAAGAAATGGCTGGTATGGATGTCCTTTGCAGCGACAAGACAGGTACACTCACACTTAACAAGCTGAGTGTTGACAAGAATTTGATTGAGGTCTTCGCAAAGGGTGTGGAAAAGGATCATGTGATCCTTCTTGCTGCAAGGGCTTCCAGGACTGAAAACCAGGATGCAATAGATGCTGCCATTGTTGGAATGCTTGCCGATCCAAAAGAGGCAAGGGCTGGGGTAAGAGAGGTGCACTTCTTACCATTTAATCCTGTCGACAAGAGAACTGCTTTGACTTACATTGATGCTGATGGAAATTGGCACCGGGCAAGCAAAGGTGCTCCCGAGCAGATCATGACCTTGTGTAACCTCAGGGATGATGCAAAGAGGAAGGTCCATGCTATTATTGATAAGTTTGCAGAGAGAGGGCTTCGTTCACTTGCTGTTGCTAGACAGGAAGTTCCTGAGAAAACAAAAGAAAGCGCTGGTGCTCCATGGCAGTTTGTTGGTTTGTTGTCACTGTTCGACCCCCCTAGACATGACAGTGCTGAAACTATTCGTAGAGCTCTCCATCTTGGTGTAAATGTCAAGATGATTACTGGCGATCAACTTGCCATAGCCAAGGAGACCGGCCGAAGACTGGGGATGGGAACTAATATGTACCCATCTGCTTCTTTGCTTGGTCAAGACAAAGATGCAAGTATTGCTGCACTTCCAGTAGAAGAGCTGATTGAGAAGGCAGATGGTTTTGCTGGAGTATTTCCAGAACACAAATATGAAATTGTAAAGAAGTTGCAAGAGAGGAAGCACATCTGTGGAATGACTGGAGATGGTGTTAATGACGCTCCGGCTTTGAAGAAGGCTGATATTGGAATCGCTGTTGCTGATGCAACTGATGCTGCCAGAAGTGCTTCTGATATTGTCTTGACAGAACCTGGTTTGAGTGTTATTATTAGTGCAGTCTTAACTAGCAGGGCTATTTTCCAGAGAATGAAAAACTACACGATATATGCAGTATCTATTACTATCCGTATAGTGTTTGGCTTCATGTTCATAGCACTGATATGGAAATTTGACTTCTCTCCTTTTATGGTTTTGATCATTGCTATTCTGAATGATGGAACAATCATGACAATTTCAAAGGACAGGGTGAAGCCATCTCCCTTGCCTGATAGCTGGAAACTGCAAGAAATATTTGCTACTGGGATTGTACTTGGAAGTTACTTGGCGCTGATGACTGTCATATTCTTCTGGGCAATGAAAGAAACCGATTTCTTCCCTGACAAATTTGGAGTTAGACACTTGAGTCATGATGAGATGATGTCTGCTTTGTATTTACAAGTCAGTATAGTCAGCCAGGCTTTGATATTTGTAACCCGTTCTCGAAGCTGGTCCTTTATTGAACGCCCTGGAATGCTGTTAGTTTGCGCTTTCGTTATTGCTCAGCTGATTGCTACAATCATAGCAGTATATGCTGACTGGGGCTTTGCAAAGGTGAAAGGAATTGGTTGGGGTTGGGCAGGAGTCATCTGGCTCTACAGTATTGTCTTCTATATTCCACTTGATGTCATGAAGTTTGCCACCCGTTATGTATTGAGTGGCAAGGCTTGGGTAAACATGCTAGAAAACAAGACTGCCTTCACCACCAAGAAAGACTACGGTAAGGAGGAGAGGGAAGCTCAATGGGctcatgctcagagaaccctgcatggacttcaaccaccagaaacttctggcattttcaatgagaagaacagttatagagaactctctgagattgctgagcaggccaagagaAGAGCTGAAGTTGCAAGGCTTCGTGAGCTTCACACACTGAAGGGACATGTTGAGTCTGTGGTGAAGCTGAAGGGTTTGGACATTGATACAATCCAGCAGCACTACACGGTGTGA 2862 0.4291 MAADKAAISLEEIKNETVDLERIPIEEVFQQLKCTREGLSSDEGANRLQIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWTEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTRGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLAEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDADGNWHRASKGAPEQIMTLCNLRDDAKRKVHAIIDKFAERGLRSLAVARQEVPEKTKESAGAPWQFVGLLSLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLQEIFATGIVLGSYLALMTVIFFWAMKETDFFPDKFGVRHLSHDEMMSALYLQVSIVSQALIFVTRSRSWSFIERPGMLLVCAFVIAQLIATIIAVYADWGFAKVKGIGWGWAGVIWLYSIVFYIPLDVMKFATRYVLSGKAWVNMLENKTAFTTKKDYGKEEREAQWAHAQRTLHGLQPPETSGIFNEKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00784 953 Pfam Cation transporter/ATPase, N-terminus 23 85 IPR004014 -
Gma13g00784 953 SUPERFAMILY Calcium ATPase, transduction domain A 136 233 IPR008250 -
Gma13g00784 953 SUPERFAMILY HAD-like 329 639 IPR036412 -
Gma13g00784 953 PRINTS P-type cation-transporting ATPase superfamily signature 183 197 - -
Gma13g00784 953 PRINTS P-type cation-transporting ATPase superfamily signature 333 347 - -
Gma13g00784 953 PRINTS P-type cation-transporting ATPase superfamily signature 487 498 - -
Gma13g00784 953 PRINTS P-type cation-transporting ATPase superfamily signature 509 519 - -
Gma13g00784 953 PRINTS P-type cation-transporting ATPase superfamily signature 592 611 - -
Gma13g00784 953 PRINTS P-type cation-transporting ATPase superfamily signature 615 627 - -
Gma13g00784 953 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 38 808 IPR006534 GO:0008553|GO:0016021|GO:0120029
Gma13g00784 953 Pfam haloacid dehalogenase-like hydrolase 329 606 - -
Gma13g00784 953 PRINTS H+-transporting ATPase (proton pump) signature 449 467 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma13g00784 953 PRINTS H+-transporting ATPase (proton pump) signature 564 580 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma13g00784 953 PRINTS H+-transporting ATPase (proton pump) signature 592 608 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma13g00784 953 PRINTS H+-transporting ATPase (proton pump) signature 623 648 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma13g00784 953 PRINTS H+-transporting ATPase (proton pump) signature 762 783 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma13g00784 953 Pfam E1-E2 ATPase 135 312 - -
Gma13g00784 953 PANTHER PLASMA MEMBRANE ATPASE 2 933 - -
Gma13g00784 953 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 567 681 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma13g00784 953 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 105 353 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma13g00784 953 SFLD p-type atpase 315 643 IPR044492 -
Gma13g00784 953 Gene3D - 345 492 IPR023299 GO:0000166
Gma13g00784 953 Gene3D - 330 629 IPR023214 -
Gma13g00784 953 Gene3D - 136 220 - -
Gma13g00784 953 SMART Cation_ATPase_N_a_2 19 91 IPR004014 -
Gma13g00784 953 Coils Coil 904 924 - -
Gma13g00784 953 Gene3D - 902 953 - -
Gma13g00784 953 SUPERFAMILY Calcium ATPase, transmembrane domain M 19 849 IPR023298 -
Gma13g00784 953 CDD P-type_ATPase_H 38 843 IPR006534 GO:0008553|GO:0016021|GO:0120029
Gma13g00784 953 ProSitePatterns E1-E2 ATPases phosphorylation site. 335 341 IPR018303 -
Gma13g00784 953 PANTHER CALCIUM-TRANSPORTING ATPASE 2 933 - -
Gma13g00784 953 Gene3D - 98 817 - -
Gma13g00784 953 SFLD C1.7: P-type atpase like 315 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00784 Gma-Chr13 22103810 22111561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00784 7 953 Primary Pumps ATPases AT5G57350 86.091 0.0 1646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00784 K01535 - gmx:100816905 1804.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00581 17 4811538 4818412 Gma13g00784 13 22103810 22111561 GST
Gma13g00784 13 22103810 22111561 Gma15g01514 15 14102086 14110270 PCT
Gma13g00784 13 22103810 22111561 Gma09g00506 09 5173411 5182364 PCT
Gma15g01514 15 14102086 14110270 Gma13g00784 13 22103810 22111561 PCT
Gma09g00506 09 5173411 5182364 Gma13g00784 13 22103810 22111561 PCT