Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00768 ATGAATGAATACTGGACCTCGTTGGCGTCACTTCTGGGTGTGTTTGCCTTCTGCCAAACCATCCTCCAAGCAGTGTTCCCACCGGAGCTCCGCTTCGCTTCCGTGAAGCTCTTCTACCGTATCTTCCACTGCTTCTCCTCCTACTGCTACTTCGACATAACGGAGATCGACGGCGTCAACACCAACGAGCTCTACAACGCCGTCCAGCTCTACCTGAGCTCCTCCGTCTCCATCACCGGTAACCGCCTCAGCCTCACACGCGCCGTCAACTCCTCGGGCTTCACCTTCGGGCTGGCCAACAATGACAGCATCGTCGACACCTTCAATGGCGTGAACGTGCTGTGGGAGCACGTGGTGACGCAGCGGCAGGCCCAGACCTTCTCGTGGCGCCCACTCCCCGACGAGAAGCGTGGCTTCACGCTCCGGATCAAGAAGAAGGACAAGTCCTTCATCCTAAACTCCTACCTGGATTACATTATGGAGAGAGCCAGCGACATTCGGAGGAACAATCAGGATCGGCTCCTCTACACGAATTCCAGGGGTGGCTCCCTGGACTCCCGGGGCCACCCTTGGGAATCTGTGCCCTTCAAGCACCCCAGCACCTTTGACACATTGGCTATGGACCCTCACAAGAAGAAAGAAATCATGGAGGATCTTCTGGACTTCGCCAATGGACAATCTTTTTACCATAAAACCGGTAGGGCTTGGAAGAGAGGCTACCTTCTATATGGCCCTCCAGGTACTGGCAAGTCAAGCATGATCGCCGCCATGGCCAATTTTCTCGGTTATGATATTTACGATCTTGAGCTCACTGAGGTGCATAACAACTCTGAACTCAGGAAGCTTCTCATGAAAACCAGCTCCAAGTCGATAATAGTCATTGAAGATATTGATTGCTCCATCAACCTCACCGGTAGAAAGAACAATAACGGTTCTGTTTCTGTTTCTGCTTCGAGGAGTTACTATGATTCCGAGATACGAGCAGGTGGTGGTTGTGGTGAGGAGGGTGGGAATAATATTACTCTGTCTGGGTTGCTGAATTTTACTGATGGCTTGTGGTCTTGTTGTGGAAGTGAGAGGATTTTTGTGTTTACCACCAACCACATTGAGAAGCTTGACCCGGCTCTGCTGCGGAGTGGGAGAATGGATATGCATATTTTCATGAGTTACTGTTCGTTCCCGGCGCTGAAGATTCTGCTGAAGAATTACTTGGGGTGTGAAGCGTGTGAGCTTGAGGAATCGATTTTGAAGCAGCTGGAGGAGGTTGTCGACGTGGCGCGGATGACTCCGGCCGATATCAGCGAGGTCTTGATCAAGAACAGACGCAAGAAGGAGAAGGCGGTGGAGGAGTTGTTTGAGACGTTGAAGCTGAGAGCGGAGATGAATGAGAAGAGTGGTGTTTTGAGGGGAAAAAATGTGGTTGAAGAGGAGGAAGAAGAGGAAGAGCAAGAGAAGAGGGCTTTGGACAGTGAGAGTCCTAAGCAGGAGTCAGAGATTGAGGACAATTGCAAGGAGGAGGAGGAAGAAAAGAAGATCAAGTGA 1542 0.5123 MNEYWTSLASLLGVFAFCQTILQAVFPPELRFASVKLFYRIFHCFSSYCYFDITEIDGVNTNELYNAVQLYLSSSVSITGNRLSLTRAVNSSGFTFGLANNDSIVDTFNGVNVLWEHVVTQRQAQTFSWRPLPDEKRGFTLRIKKKDKSFILNSYLDYIMERASDIRRNNQDRLLYTNSRGGSLDSRGHPWESVPFKHPSTFDTLAMDPHKKKEIMEDLLDFANGQSFYHKTGRAWKRGYLLYGPPGTGKSSMIAAMANFLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSINLTGRKNNNGSVSVSASRSYYDSEIRAGGGCGEEGGNNITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSFPALKILLKNYLGCEACELEESILKQLEEVVDVARMTPADISEVLIKNRRKKEKAVEELFETLKLRAEMNEKSGVLRGKNVVEEEEEEEEQEKRALDSESPKQESEIEDNCKEEEEEKKIK 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00768 513 Pfam ATPase family associated with various cellular activities (AAA) 241 389 IPR003959 GO:0005524|GO:0016887
Gma13g00768 513 MobiDBLite consensus disorder prediction 486 513 - -
Gma13g00768 513 PANTHER BNAC03G12930D PROTEIN 2 505 - -
Gma13g00768 513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 452 IPR027417 -
Gma13g00768 513 CDD AAA 237 390 - -
Gma13g00768 513 Gene3D - 192 390 IPR027417 -
Gma13g00768 513 SMART AAA_5 236 392 IPR003593 -
Gma13g00768 513 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
Gma13g00768 513 PANTHER BCS1 AAA-TYPE ATPASE 2 505 - -
Gma13g00768 513 Coils Coil 471 491 - -
Gma13g00768 513 MobiDBLite consensus disorder prediction 468 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00768 Gma-Chr13 21894077 21895838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00768 184 456 Miscellaneous Gene Families AT3G02450 25.685 4.91e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00768 - - gmx:100813109 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00768 13 21894077 21895838 Gma13g00768 13 21894077 21895838 ECH
Gma17g00599 17 5002081 5020871 Gma13g00768 13 21894077 21895838 GST