Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00763 ATGGAACTTTCACCACAAGAATTCATTTTCCGTTCCCCACTCCCCGATATTCCCATCCCCACACACCTCCCATTGTACTCTTACTGCTTCCAAAAGTTGTCACAGTTCCATGACCGTCCATGCCTCATCGACGGCGACACCAGCGAAACCCTCACCTACGCCGACGTCGATCTCTCCGCTCGCCGCATCTCCGCCGGCCTCCACAAAATCGGCATCTGCCAGGGTGACGTCATCATGCTCGTCCTCCGCAACTGCCCGCAGTTCGCACTCGCCTTCCTGGGCGCCACTCACCGCGGCGCCGTCGTCACCACCGCCAACCCCTTCTACACTCCGGCGGAGCTCGCGAAGCAAGCGATGGCCACGAAAACCAGGCTGGTCATAACGCAATCCGCGTACCTTGAGAAAATCAAGAGTTTCGCGGACGACAGCGATGTCATGGTGATGTGCATTGATGACGATTATTCTTCTGAAAACGATGGCGTTTTGCATTTCTCAACGCTCACCAACGCCGACGAAAGGGAAGCCCCTGCCGTTAAGATTAACCCTGACGACCTCGTTGCGCTTCCGTTTTCTTCTGGCACGTCTGGGCTCCCCAAGGGGGTTATGTTATCGCATGAAAACTTGGTTACCACGATATCGCAGTTAGTTGACGGCGAAAACCCGCACCAGTACACGCACAGCGAGGATGTGTTACTCTGTGTGCTGCCTATGTTTCACATCTATGCGCTCAATTCTATTTTGCTCTGCGGGATTCGATCTGGTGCGGCTGTACTTATTGTGCAAAAGTTTGAGATCACTACTCTGTTTGAGCTCATCGAGAAGTACAAGGTGACGGTTGCGTCGTTTGTTCCTCCCATCGTTTTGGCGTTGGTTAAGAGCGGAGAGACTCATCGCTACGACCTGTCGTCTATTCGCGCTGTGGTCACCGGTGCGGCACCGTTGGGAGGGGAACTCCAAGAAGCCGTTAAGGCTAGGCTACCACACGCTACTTTTGGACAGGGATATGGGATGACAGAAGCAGGACCACTTGCCATTAGCATGGCATTTGCAAAAGAACCCTCGAAGATTAAACCAGGTGCATGCGGAACCGTTGTGAGAAACGCTGAGATGAAAATCGTGGATACAGAAACGGGTGATTCACTTCCAAGAAACAAATCCGGAGAAATTTGCATAAGAGGGGCAAAGGTCATGAAAGGATATCTAAATGACCCAGAGGCTACAGAGAGAACTATAGACAGAGAAGGATGGTTACACACAGGAGATATTGGTTTCATTGATGATGATAATGAACTCTTCATTGTTGATCGGTTAAAGGAATTGATCAAATACAAAGGATTCCAAGTAGCTCCTGCTGAGCTCGAAGCTTTGTTGATTGCTCACCCAAACATTTCTGATGCTGCCGTTGTAGGTATGAAAGATGAAGCTGCAGGAGAAATTCCAGTTGCATTTGTTGTAAGGTCAAATGGTTCTGAGATTACCGAGGATGAAATAAAGACATACATTTCACAACAGGTGGTATTTTACAAGAGAATAGGTAGAGTTTTCTTCACGGACTCTATTCCTAAAGCACCCTCCGGCAAAATTCTGCGAAAGGTATTAACTGCAAGACTTAACGAAGGTTTGGTGGTGGCCAATTAG 1638 0.4939 MELSPQEFIFRSPLPDIPIPTHLPLYSYCFQKLSQFHDRPCLIDGDTSETLTYADVDLSARRISAGLHKIGICQGDVIMLVLRNCPQFALAFLGATHRGAVVTTANPFYTPAELAKQAMATKTRLVITQSAYLEKIKSFADDSDVMVMCIDDDYSSENDGVLHFSTLTNADEREAPAVKINPDDLVALPFSSGTSGLPKGVMLSHENLVTTISQLVDGENPHQYTHSEDVLLCVLPMFHIYALNSILLCGIRSGAAVLIVQKFEITTLFELIEKYKVTVASFVPPIVLALVKSGETHRYDLSSIRAVVTGAAPLGGELQEAVKARLPHATFGQGYGMTEAGPLAISMAFAKEPSKIKPGACGTVVRNAEMKIVDTETGDSLPRNKSGEICIRGAKVMKGYLNDPEATERTIDREGWLHTGDIGFIDDDNELFIVDRLKELIKYKGFQVAPAELEALLIAHPNISDAAVVGMKDEAAGEIPVAFVVRSNGSEITEDEIKTYISQQVVFYKRIGRVFFTDSIPKAPSGKILRKVLTARLNEGLVVAN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00763 545 SUPERFAMILY Acetyl-CoA synthetase-like 15 539 - -
Gma13g00763 545 Gene3D - 438 541 IPR045851 -
Gma13g00763 545 Pfam AMP-binding enzyme 32 443 IPR000873 -
Gma13g00763 545 ProSitePatterns Putative AMP-binding domain signature. 188 199 IPR020845 -
Gma13g00763 545 CDD 4CL 19 533 - -
Gma13g00763 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 537 - -
Gma13g00763 545 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Gma13g00763 545 Gene3D - 4 437 IPR042099 -
Gma13g00763 545 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 5 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00763 Gma-Chr13 21827933 21835326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00763 7 505 Monolignol Biosynthesis Gene Families AT1G51680 64.286 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00763 K01904 - gmx:100810418 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00763 13 21827933 21835326 Gma13g00763 13 21827933 21835326 ECH
Gma17g00604 17 5059594 5064271 Gma13g00763 13 21827933 21835326 GST