Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00762 ATGAATTTCCATAACCCCAATTATTCTCTTCACCTACGCCAACCAGATGATGAGAACCATCTCAACCTAGATCTTCTTCTTGAGCCATCTTCTTCTTCATCATCTTCACCTTCACCTATTAGTCCCGTTGAGCCACGGATATTCTCATGCAACTATTGCCAGAGAAAGTTCTATAGCTCTCAAGCACTAGGGGGTCATCAAAATGCTCACAAGCTTGAAAGGACACTGGCCAAGAAGAGCAGGGAACTGAGTTCAAACATGCAATCTTATGGATCACCGGAGCAAAGATCAAACTTTGGTGCTTCACACCATCTTGGTCGTGCTCTTGGGGTTGTGGATAACCAAGGACAAAGTTATGCGAGGCTTGGTGGAAGAAAAGAGTTCAGTTATGGTTCCAAGGAAGGGGTAGGGGTGGCTTCTTCCTGGTCAAGGGGTTATACTTCTGAACATGTTCAGGAGGATATGGGCCAACTGGACTTGTCGTTGAGGCTTTGA 495 0.4566 MNFHNPNYSLHLRQPDDENHLNLDLLLEPSSSSSSSPSPISPVEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSNMQSYGSPEQRSNFGASHHLGRALGVVDNQGQSYARLGGRKEFSYGSKEGVGVASSWSRGYTSEHVQEDMGQLDLSLRL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00762 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Gma13g00762 164 MobiDBLite consensus disorder prediction 81 99 - -
Gma13g00762 164 MobiDBLite consensus disorder prediction 76 100 - -
Gma13g00762 164 Gene3D Classic Zinc Finger 36 103 - -
Gma13g00762 164 SUPERFAMILY beta-beta-alpha zinc fingers 45 75 IPR036236 -
Gma13g00762 164 PANTHER BNAC02G44440D PROTEIN 5 164 - -
Gma13g00762 164 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Gma13g00762 164 PANTHER ZINC FINGER PROTEIN JAGGED 5 164 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00762 Gma-Chr13 21813805 21814299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00762 4 164 C2H2 Transcription Factor Family AT5G57520 46.386 3.22e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma13g00762 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00762 13 21813805 21814299 Gma13g00762 13 21813805 21814299 ECH
Gma17g00606 17 5114744 5115232 Gma13g00762 13 21813805 21814299 GST