Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00754 ATGTGTAATAAAGGGTTTCAATGCTTGAGCCAGTGTGAGAGTGTAATTGATTATAGGCAAGGATTCATCATGGATAGTCCAATTCGATCGCCGGCCACCGGTTCGGGTTCCGGTTCCGGTGAAGATAACCGGCGTGTTAAGTTCTTGTGCAGCTTTCTGGGGAGCATAATGCCTCGCCCCCAAGATGGGAAGCTGCGTTATGTAGGCGGCGAGACACGAATTGTGAGTGTTCACAGGGATATTAGCTATGAAGAGTTGATGGGGAAGATGAGAGAGCTGTATGATGGGGCTGCTGTGTTGAAGTACCAGCAGCCTGATGAGGATCTTGATGCTCTAGTCTCTGTTGTCAATGATGATGATGTGGTTAACATGATGGAGGAGTATGATAAGTTGGGGTCAGGGGATGGATTCACTAGGCTCAGGATTTTTCTGTTTTCGCAATCCGAGCAGGATGGTTCCTCGCATTTCATTGATGGGGATGATTCTGAGAGGAGGTATGTTGATGCATTGAATAGTTTAAACGATGGTTCTGACTTTAGGAGGTTGCAACAAGGGGAGTTTCCTATGATGAGTCCTGTTGAGGATATTCATGTGGTTGCTGATCAGTTCTATAGTCCAATCAGTGTGGAAAGTGGGATTCATAGTCAGAGAAGTGGGGACCTATCTATGTCGCCGTATAATATGCATCATCTCACGGTCCAGCACCCGAAATCTATGGGCCAGAGGTATAATGAAATGGATGCTCCTTGGAATCCTGCCTATTACTCCCCTAGGCACCATGGTCTCCATGAATTTCCATCCTCTCCTTCTGGTACAAGGTACCGAGTGCCATTTCCCGAGTTACCAGATAAGTGCATTGATAGAGTGTCGGAAGAGTATGTGCGACATCACGTAAATCATCATCCTGTGTATGACAATCAACTGCAATATTCTGAAAATGTTATGTGGGTGCCGACTGGAGCAGCACATGGCGAAAAGTCGGCTTTTCCAGGCAATATTCTTCATAGTCCTCATGTTGTTGATGGGAACAGTATATGTGAGCAGTGTCGCATGGGTTTTCATAGAGGTCAACCACATATGGAGCATTCTAATATAAGTAATGGACTTCCACAAGCTGCTAATCCATGTGCAGAATGCCCCCCACCAAATAGGGATACTTTCACAGTGAATGCTGATGCAAAGTTACATCCGGCAATCTATCCCAATGAACCTAATAATGATCATAGGTCTGTTTATAATGATACTCAGAATCACGAGAGAGGATGGGGCTTGCAGCATCCAACTGCTCGGGTTGAGGAATCAAGAGTACATGTCTCTGGATCTGGAAGAATGTTTGATGTTCCTGTTGCAAATTTCTCTCTTGGGCATGGTAGTGTGACTGATGGGCATAACTTGTCTTCCAATTATGTTCACCAGCAGGCTGGACCTGAATTGGGGCCCGAACTGTTCCCTGACCAAACCGTGACTTCTATACCACCTATCCAAATTCCTCCACTGGAAGAGTGCAATGTGCAGTATGGAAATTCACCTTCTCCTTATGGATTAGATTGTAATTACGCTGTGCCCCGTGGTCATCCACCTGGTTTCTGGAGAAACACTCCAGTTCCTGTTCATATTGGACCATCTTATGAGGCTGCTACTTCACCTCAGCCGCTGAATAGTATGATGAATGTGGGATTAATCAGGGGAGAGGGCAGTACAGGATTTTTCATTGGACCAGATAGTCAAAATCATTGGGTTGATTCCTCACAGAAATTAACAGGACATGATGGTACAGCCATCCCAGAATATCCATATGCACATGCTCTGAATCCAGTGCCCCTTGGTCAAGAAAATCAACACCCAGATATTGTAGATACCATTCATCCCCCACAGGACATGAATGCTGGTACCTGCTTGGAACCCTTGCAGCTGCCAAAATCATCTTTTAATATGGTTCAAAATCAACAGGTTTTAAGAGATGATACTCATTTGACTGAAGCAAAGAGTTTTGAATCTAATAGTTTGCTTGGTGAAGGAATAGTGATAAAAATTGAGGACAATGTTGAAAACCCTGGCGCACAGACTATATCTTCTTCAGAGCAAAATAAAATTGCTGAGCATGCATGTGAAGCTGCTGCCTCTGTTGAGTCTAATAATTTAAAGTCAAAACCTGAAGCAGACTGCGTGCATGTTGAGAAACTGGCTGATAAGGACCCTTCTGTTCCAGAAGATTCTAAACATTTAGTTGATCAATTCAGCTTCTTGCCTGAGTTGATTGCTTCTGTAAAAAAGGCTGCATTAGAAGATGCCGAGGAATTGAAAGCTGCAGCTGATGAGCCTGCCAATTCTCAGAATCACAATTCAGATACCAAAGATGAAACAACAAATGAAGTAGAACCAACGAATGCTCATGGTGATTTAGAATTGGACTCTGAAAATGACCATGTAGATACTAATAAAATTGAGTCTACAAGGGCTGAGGAAGAAGCATTTGCTAATGGATTGCAGactattaacaatgatgatttggaggagatccgtgagcttggttctggaacctatggagctgtttatcatgggaaatggaaaggttctgacgttgccattaagagaataaaagccagttgttttgctggaaggccatctgaaagagcaagattgATCACAGATTTCTGGAAGGAGGCGTTGATGTTGAGTTCATTGCATCATCCAAATGTTGTCTCCTTTTATGGCATTGTTCGTGATGGCCCCGATGGTTCTTTAGCAACAGTCACAGAGTTCATGATTAATGGATCTTTGAAACAGTTCTTGCATAAGAAAGATAGAACAATAGATCGTCGTAAGAGGCTCATTATAGCCATGGATGCTGCATTTGGGATGGAGTATTTGCATGGAAAAAACATTGTTCATTTTGATTTGAAATGTGAGAATCTATTGGTCAATATGAGAGATCCTCAACGGCCTATCTGCAAGattggtgatttgggtttatcaaaggttaaacagcacactctagtgtctggtggagtacgggggactttgccatggatggctcctgagctacttagtgggaaaagcaatatggtgtcagagaagattgatgtctactcattcggtatagtcatgtgggaattactcacagggaatgaaccctatgctgatatgcattgtgcttcaataatagGAGGAATTGTCAACAACTCTTTACGTCCTCAAATTCCAACATGGTGTGATCCTGAGTGGAAATCTCTAATGGAAAGTTGTTGGGCTTCTGATCCAGTAGAAAGGCCATCATTTTCAGAAATTTCCAAGAAGCTGAGGAGTATGGCTGCTTCAATGAATTTGAAATAG 3333 0.3846 MCNKGFQCLSQCESVIDYRQGFIMDSPIRSPATGSGSGSGEDNRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVHRDISYEELMGKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQSEQDGSSHFIDGDDSERRYVDALNSLNDGSDFRRLQQGEFPMMSPVEDIHVVADQFYSPISVESGIHSQRSGDLSMSPYNMHHLTVQHPKSMGQRYNEMDAPWNPAYYSPRHHGLHEFPSSPSGTRYRVPFPELPDKCIDRVSEEYVRHHVNHHPVYDNQLQYSENVMWVPTGAAHGEKSAFPGNILHSPHVVDGNSICEQCRMGFHRGQPHMEHSNISNGLPQAANPCAECPPPNRDTFTVNADAKLHPAIYPNEPNNDHRSVYNDTQNHERGWGLQHPTARVEESRVHVSGSGRMFDVPVANFSLGHGSVTDGHNLSSNYVHQQAGPELGPELFPDQTVTSIPPIQIPPLEECNVQYGNSPSPYGLDCNYAVPRGHPPGFWRNTPVPVHIGPSYEAATSPQPLNSMMNVGLIRGEGSTGFFIGPDSQNHWVDSSQKLTGHDGTAIPEYPYAHALNPVPLGQENQHPDIVDTIHPPQDMNAGTCLEPLQLPKSSFNMVQNQQVLRDDTHLTEAKSFESNSLLGEGIVIKIEDNVENPGAQTISSSEQNKIAEHACEAAASVESNNLKSKPEADCVHVEKLADKDPSVPEDSKHLVDQFSFLPELIASVKKAALEDAEELKAAADEPANSQNHNSDTKDETTNEVEPTNAHGDLELDSENDHVDTNKIESTRAEEEAFANGLQTINNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLITDFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPICKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGNEPYADMHCASIIGGIVNNSLRPQIPTWCDPEWKSLMESCWASDPVERPSFSEISKKLRSMAASMNLK 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00754 1110 Pfam Protein tyrosine and serine/threonine kinase 838 1100 IPR001245 GO:0004672|GO:0006468
Gma13g00754 1110 SMART serkin_6 837 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00754 1110 MobiDBLite consensus disorder prediction 784 809 - -
Gma13g00754 1110 Gene3D Transferase(Phosphotransferase) domain 1 923 1109 - -
Gma13g00754 1110 Pfam PB1 domain 61 146 IPR000270 GO:0005515
Gma13g00754 1110 Gene3D Phosphorylase Kinase; domain 1 823 922 - -
Gma13g00754 1110 PANTHER - 22 1110 - -
Gma13g00754 1110 CDD PB1_UP2 49 145 - -
Gma13g00754 1110 CDD STKc_MAP3K-like 843 1100 - -
Gma13g00754 1110 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
Gma13g00754 1110 ProSiteProfiles Protein kinase domain profile. 837 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00754 1110 ProSitePatterns Protein kinases ATP-binding region signature. 843 864 IPR017441 GO:0005524
Gma13g00754 1110 SMART PB1_new 60 145 IPR000270 GO:0005515
Gma13g00754 1110 Coils Coil 1105 1110 - -
Gma13g00754 1110 MobiDBLite consensus disorder prediction 768 809 - -
Gma13g00754 1110 Gene3D - 64 148 - -
Gma13g00754 1110 SUPERFAMILY Protein kinase-like (PK-like) 824 1098 IPR011009 -
Gma13g00754 1110 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 22 1110 - -
Gma13g00754 1110 PRINTS Tyrosine kinase catalytic domain signature 919 932 IPR001245 GO:0004672|GO:0006468
Gma13g00754 1110 PRINTS Tyrosine kinase catalytic domain signature 956 974 IPR001245 GO:0004672|GO:0006468
Gma13g00754 1110 PRINTS Tyrosine kinase catalytic domain signature 1027 1049 IPR001245 GO:0004672|GO:0006468
Gma13g00754 1110 PRINTS Tyrosine kinase catalytic domain signature 1071 1093 IPR001245 GO:0004672|GO:0006468
Gma13g00754 1110 SUPERFAMILY CAD & PB1 domains 62 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00754 Gma-Chr13 21732637 21739126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00754 45 1110 MAP Kinase Kinase Kinase AT5G57610 54.406 0.0 1039
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gma13g00754 PK_Tyr_Ser-Thr 2.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00754 - - gmx:100779077 2259.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00754 13 21732637 21739126 Gma13g00754 13 21732637 21739126 ECH
Gma17g00614 17 5179039 5184548 Gma13g00754 13 21732637 21739126 GST
Gma13g00754 13 21732637 21739126 Gma15g01916 15 25846426 25857378 PCT
Gma15g01916 15 25846426 25857378 Gma13g00754 13 21732637 21739126 PCT