Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00730 ATGGAGTGTATTGACACCTGGCTCTTGTCTCACTCTACTTGTCCTCTTTGTAGAGCCACCTTGCTCCCTGAATTCTCTGCAAGCAACGCATGTTCTCCTATTGTTCTTGTCCTTGAATCTGGGAGTAGTGAGAGCTCCAGGGAGATTGTTCCTGAAAGAGAGCCTGCTGCTGCTGCTGTTGGAAGGACTAGTTCGGTTATCACCGCAAATTCTCGCCTTGGTTGCCGTGGAGATAGTGAATTTGGATCAACCCGTGTGGATTTGAAATCAGGTGAGTTGTTTAGTGAAATTCCTGATCCAACAGTGCAAAATGGTGTGGAAAAGGTTGTTACTGTTAAGCTGGGGAAGTTCAGAAGTgtggatggtggaggtggaggtggagatggaggtggGGAAGGGACTAGTAGTATCAACAATGTGGATGCTAGAAGGTGTTTTTCTATGGGTTCTTTTGCTTATGTTATGGATGAGAGTTCTTCATTGCAAGTACCTATAAGAACTCCAATCAAGAAGCAATCAAGTAAGAAGAAGTCTGGTTTGCCTTTGACACCAGGGCACAGGCCTGCAATGTCAGAATGTGACTGTGAATCCAGAAGGGATTTCAAGTTTGCAGGGTTTGATGCAACAACTATAGTTGAGGATGATGCTGCTAGTACTGGGGCTACAACTGCAAGCACAACTTGTAATGGGAACAGTGCTGCTGCCATCGGAAGGAGCAGAAAGGAGAGTTTTTCTATATCAAAGATTTGGCTTAGGGGGAAGAAGGATAAGCCAAATGCTGGGGCAGATTCATCTAGAAGGGCTGTTTCGTTTCGATTCCCGGTGAAATCTAGTGTTGTTGCTGCTGCTTCTGGTAGTGCTGATGATGATGATTTGAAGGGCAAGAATTGCAAGTTTGATACAAGGAGTACTATGTCTGAGATGGATATTGGAAAGTGGGAGAATGGAAGAGGGACTGAGTTCGATTATGATGAAGAAAACCAGAGTTGTTATAGTATGGATTCTTCTCAAGCTAGGGCGCCATCTTTTGCTAGAAGGACTTTGCTTTGGCTCACAGGAGGAAGACAGAATAAGGTTGTTCACTCTGCTTCCAACCTCTAG 1101 0.4305 MECIDTWLLSHSTCPLCRATLLPEFSASNACSPIVLVLESGSSESSREIVPEREPAAAAVGRTSSVITANSRLGCRGDSEFGSTRVDLKSGELFSEIPDPTVQNGVEKVVTVKLGKFRSVDGGGGGGDGGGEGTSSINNVDARRCFSMGSFAYVMDESSSLQVPIRTPIKKQSSKKKSGLPLTPGHRPAMSECDCESRRDFKFAGFDATTIVEDDAASTGATTASTTCNGNSAAAIGRSRKESFSISKIWLRGKKDKPNAGADSSRRAVSFRFPVKSSVVAAASGSADDDDLKGKNCKFDTRSTMSEMDIGKWENGRGTEFDYDEENQSCYSMDSSQARAPSFARRTLLWLTGGRQNKVVHSASNL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00730 366 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 1 273 - -
Gma13g00730 366 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 1 273 - -
Gma13g00730 366 SUPERFAMILY RING/U-box 2 25 - -
Gma13g00730 366 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00730 Gma-Chr13 21451817 21453792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00730 1 366 C3H Transcription Factor Family AT2G18650 36.119 3.62e-46 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00730 - - gmx:100797283 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00730 13 21451817 21453792 Gma13g00730 13 21451817 21453792 ECH
Gma17g00640 17 5442836 5444911 Gma13g00730 13 21451817 21453792 GST