Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00724 ATGCGAAACATCAACTCAGTTAAGCAAGAATTCCTGAAGAAATGGATATGGGGTCTCAGAAAATACAGCTCTCAGAAGAAAAACATGAGTCTGATGGAGAGAAAGAAAGCCATAAAGCTGTCAGCAGATTTAGCCATGGCTTCCACCAGAAACAAATCCACTCGCTGGAGCAGGGCCCTTATTGCGAATGCTTCAAGAGATGGCAACAACAAAGTCCTCACGGAACACGTGTCACCATCATCATCATCACCACCACAGAGGCCGGCAACAAGGAAAAGCTTCAGAAGGATCAGAAGCTGCAGAAACATGTTGATCAGAAGAAACCGTGCAGCAGTCCACTGCAGAACAAAGGATAGGGTGGTGGCGGCGAGTTTCGTTGCGAAGAGGCTGGTCCAGAAGAGAACGCGAAGGCTCAAGAGTCTCTTACCAGGAGGAGAATCCATGGACGCTGTGTCTTTGGTTGAAGAAACCCTAGATTATATACAATCACTGCGAGCTCAAGTTGAAGTTATGAGACGTCTTGTCACTGCCTCAGAGATCATGATCCTAAATCCATCAAGGGGTGGAGAAAAAGAGGCGCTCCCATATATACGTTAA 597 0.4673 MRNINSVKQEFLKKWIWGLRKYSSQKKNMSLMERKKAIKLSADLAMASTRNKSTRWSRALIANASRDGNNKVLTEHVSPSSSSPPQRPATRKSFRRIRSCRNMLIRRNRAAVHCRTKDRVVAASFVAKRLVQKRTRRLKSLLPGGESMDAVSLVEETLDYIQSLRAQVEVMRRLVTASEIMILNPSRGGEKEALPYIR 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00724 198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 178 IPR036638 GO:0046983
Gma13g00724 198 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 177 - -
Gma13g00724 198 MobiDBLite consensus disorder prediction 70 93 - -
Gma13g00724 198 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 177 IPR044660 GO:0006355
Gma13g00724 198 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00724 Gma-Chr13 21403259 21404600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00724 1 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 41.111 1.16e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00724 - - gmx:100809722 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00724 13 21403259 21404600 Gma13g00724 13 21403259 21404600 ECH
Gma17g00645 17 5490239 5491527 Gma13g00724 13 21403259 21404600 GST