Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00692 ATGGCAGCTACGATGAATTTCTACAACGAAACATCACAACAAGTTCAGTCAGATCCATTCAGAGGAGAGCTCATGGAAGTTCTAGAACCTTTTATGAAAACTTGTCCTTCCTCAACTCCCTCTATTCTCTCCTCAGATTCACCATCACCTTCCTCTTACTCTCCTTTACTACCTCCACACCCCAGTTTCTCCACATACACCCCCTCTGCCTACTTATTCCAAAACCAACAACCCTTAATAGGCTTTGAGCAACAACCAAGTTCCCTTCTCGGGCTCAACCACCTAAGCACGTCTCAGATTTCCCAGATCCAAGCCCAAGCCCAAGCCCAGAACTCGCTCTCTCTTAATTTCTTGGGCCCCAAGCCCGTTCCTATGAAGCACGTTGGTGGGCCGGCGAAGCCCACGAAGCTGTACCGGGGCGTGAGGCAGAGGCATTGGGGGAAGTGGGTGGCGGAGATAAGGCTACCGAAGAACCGAACCAGGCTTTGGCTCGGAACCTTCGACACAGCCGAGGAAGCCGCTTTGGCTTACGACAAAGCCGCGTACAGGCTCCGAGGCGACTTGGCGAGGCTGAACTTCCCGAACCTGAAAGGCTCGTGCCCCGGCGAGGAGTACAAGCCTATGCAGGCTGCGGTGGACGCTAAGCTCGACGCAATCTGCGCGAACTTGGCGGAAATGCAGAAGCAAGGGAAGAACGAGAAGGGTGCCAGGTCGGGGAAGAAGTCGAAGCAAGGTCCGAACCTGGAGGCGAAGCCCGAACCTGAAGCTTCGGGTTCCGGTGCTGCTGCTCTGTCTCCTGAAAGTGAGGGTTCTGCGGATTCTTCTGCTTTGTCTGATCTTACCTTTGATGTAACCGAGCCGCAATGGGAGGATGCTTCAGCACATTTTAATTTGCAAAAGTTTCCTTCTTATGAGATCGATTGGGATTCTCTCTGA 936 0.5299 MAATMNFYNETSQQVQSDPFRGELMEVLEPFMKTCPSSTPSILSSDSPSPSSYSPLLPPHPSFSTYTPSAYLFQNQQPLIGFEQQPSSLLGLNHLSTSQISQIQAQAQAQNSLSLNFLGPKPVPMKHVGGPAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYRLRGDLARLNFPNLKGSCPGEEYKPMQAAVDAKLDAICANLAEMQKQGKNEKGARSGKKSKQGPNLEAKPEPEASGSGAAALSPESEGSADSSALSDLTFDVTEPQWEDASAHFNLQKFPSYEIDWDSL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00692 311 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 310 - -
Gma13g00692 311 MobiDBLite consensus disorder prediction 228 283 - -
Gma13g00692 311 SMART rav1_2 137 200 IPR001471 GO:0003700|GO:0006355
Gma13g00692 311 MobiDBLite consensus disorder prediction 230 248 - -
Gma13g00692 311 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 310 - -
Gma13g00692 311 MobiDBLite consensus disorder prediction 268 282 - -
Gma13g00692 311 Pfam AP2 domain 138 186 IPR001471 GO:0003700|GO:0006355
Gma13g00692 311 Gene3D AP2/ERF domain 137 195 IPR036955 GO:0003700|GO:0006355
Gma13g00692 311 PRINTS Ethylene responsive element binding protein signature 138 149 IPR001471 GO:0003700|GO:0006355
Gma13g00692 311 PRINTS Ethylene responsive element binding protein signature 160 176 IPR001471 GO:0003700|GO:0006355
Gma13g00692 311 SUPERFAMILY DNA-binding domain 137 194 IPR016177 GO:0003677
Gma13g00692 311 CDD AP2 136 196 IPR001471 GO:0003700|GO:0006355
Gma13g00692 311 ProSiteProfiles AP2/ERF domain profile. 137 194 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00692 Gma-Chr13 20913470 20915275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00692 1 311 AP2-EREBP Transcription Factor Family AT1G78080 50.145 5.06e-85 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma13g00692 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00692 K09286 - gmx:100802961 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00692 13 20913470 20915275 Gma13g00692 13 20913470 20915275 ECH