Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00676 ATGAAGAAGGCCACAAGAATCGTTTCAATCTTCGTGATCTCGATGCTCTGTTTCCAAGAACTCATCCACGTTTCTTCGTCACCTTTCTTGTACGCACACCAGGTCTATGAGGAATCTTCTGGTGGAAGAAATCTTAAACAGGAACAGGAACAGGAACAGAAACATGCTCAAGAAGTGCATTGCTCCAGGGAGAGAAGTAGGGCAGCTCGGAAAGTGATAGAGGAGTATTTGACACCATTTATGGAACGAGAAAACTACCAACTTTCAAGTAAGTGCAAACTTCACCCTGAAAATGATATATTCACGGATCAGGAAGAGCATAAAATTTACATAGATCGACATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTTCGTGAAGAAAAATTTCTTGATCAGCATTTTGACAGCAGACACTACAATTTTCTGAATCTAAGTCATGGTAAGTGCTTGGGTGATTTATGTGGCGCATTGCATTGTGATGCTGTGATGAATTTCAAATCCTCTAGAAGCAAGTGCAATCCGGCAGCTGCTGCAAGAAACCGTCATCTATGCGAGAATCTTGCTGACAACTGTTTTCCTATAAGTGAGGGTCCATCAGCAGGCCGCCTTCATGAATTGTTTCTGCACCAATTTTGTGATGCTCACACTTGCTCAGGGAAACATAAACCCTTCTCTAGAGGAGGCAAGGATCAAAGTAGTTTCTTCCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATTTGGTACAAAGTGATGTGAAGAGTCGAACCCAAGAGCTTCGTCGGATCTCAAAAGCTGGATGGAAATCAAAACCATCATGA 849 0.4252 MKKATRIVSIFVISMLCFQELIHVSSSPFLYAHQVYEESSGGRNLKQEQEQEQKHAQEVHCSRERSRAARKVIEEYLTPFMERENYQLSSKCKLHPENDIFTDQEEHKIYIDRHEWRCGYCKKSFREEKFLDQHFDSRHYNFLNLSHGKCLGDLCGALHCDAVMNFKSSRSKCNPAAAARNRHLCENLADNCFPISEGPSAGRLHELFLHQFCDAHTCSGKHKPFSRGGKDQSSFFRLAAGALILVLLPVFYLFLYLVQSDVKSRTQELRRISKAGWKSKPS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00676 282 ProSitePatterns Zinc finger C2H2 type domain signature. 118 139 IPR013087 -
Gma13g00676 282 ProSiteProfiles Zinc finger C2H2 type domain profile. 116 139 IPR013087 -
Gma13g00676 282 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 282 - -
Gma13g00676 282 PANTHER ZINC FINGER PROTEIN-RELATED 11 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00676 Gma-Chr13 20594511 20598832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00676 34 282 C2H2 Transcription Factor Family AT5G63280 59.839 2.00e-105 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma13g00676 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00676 - - gmx:100780668 557.755