Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00651 ATGCAGGAGATCTTGCCCATCAACTCATTCACTATGCAGTATCTACTCAAAGGCTACGCATATACTGGTGGTGGAAGAAAACTGACACGTGTGGAAGTAACACTGGACGTTAGAAAAACGTGGCGCGTGTGCAAATTGGACCGTACCGAGAAACCGAACAAATATGGCAAGTACTGTTGCTGGTGTTTCTGGTCTTTGGAGTTGGAGGTGATGAACCTGCTTGGGACCAAGGAGATTGCAGGCTTGATGAACAATTGCTGGTTCAGAGTGAAAACAAATGTAGCAAAGCCCCACAAGGGTGAGATTGGAATAGTGTTTGAACACCCTACCCAACCAGCAAACCAACCCGGTGGTTGGATGGTAAAGGAAAAACATTTGGAGAAATCACTAGAGAAATTACCAACCCTAAGAAAGAGTGGTTCCACACAATCCATGAACACATCCTCAAAAATGTTCACCATCTCTGAAGTCAAAAAACATTGCACCTCTGACTCTACTTGGATCATCATCCATGGCCACGTGTATGACTGCACCCGCTTCCTCAAAGACCACCCTGGCGGTGTCGATAGCATCCTCATAAATGCAGACACCGACTGCACTGAAGAGTTCGATGCCATCCATTCCGACAAAGCAAAGCAAATGCTTCAAGATTTTCGAATTGGCGACCTCATGAGCACATGCAGGTAA 687 0.46 MQEILPINSFTMQYLLKGYAYTGGGRKLTRVEVTLDVRKTWRVCKLDRTEKPNKYGKYCCWCFWSLELEVMNLLGTKEIAGLMNNCWFRVKTNVAKPHKGEIGIVFEHPTQPANQPGGWMVKEKHLEKSLEKLPTLRKSGSTQSMNTSSKMFTISEVKKHCTSDSTWIIIHGHVYDCTRFLKDHPGGVDSILINADTDCTEEFDAIHSDKAKQMLQDFRIGDLMSTCR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00651 228 PANTHER NADH-CYTOCHROME B5 REDUCTASE 79 227 IPR001834 GO:0016491
Gma13g00651 228 Pfam Mo-co oxidoreductase dimerisation domain 2 79 IPR005066 GO:0016491|GO:0030151
Gma13g00651 228 SUPERFAMILY E set domains 13 94 IPR014756 -
Gma13g00651 228 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 180 187 IPR018506 GO:0020037
Gma13g00651 228 Gene3D - 1 78 - -
Gma13g00651 228 Gene3D - 79 144 - -
Gma13g00651 228 Pfam Cytochrome b5-like Heme/Steroid binding domain 154 223 IPR001199 -
Gma13g00651 228 PRINTS Cytochrome B5 signature 184 198 IPR001199 -
Gma13g00651 228 PRINTS Cytochrome B5 signature 211 223 IPR001199 -
Gma13g00651 228 PRINTS Cytochrome B5 signature 174 184 IPR001199 -
Gma13g00651 228 PRINTS Cytochrome B5 signature 199 206 IPR001199 -
Gma13g00651 228 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 149 224 IPR001199 -
Gma13g00651 228 SMART Cyt_b5_2 152 224 IPR001199 -
Gma13g00651 228 Gene3D - 145 225 IPR036400 -
Gma13g00651 228 PRINTS Eukaryotic molybdopterin domain signature 57 67 IPR008335 GO:0016491
Gma13g00651 228 PRINTS Eukaryotic molybdopterin domain signature 30 42 IPR008335 GO:0016491
Gma13g00651 228 PRINTS Eukaryotic molybdopterin domain signature 16 30 IPR008335 GO:0016491
Gma13g00651 228 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 80 IPR001834 GO:0016491
Gma13g00651 228 PANTHER NITRATE REDUCTASE [NADH] 2 79 227 - -
Gma13g00651 228 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 148 225 IPR036400 -
Gma13g00651 228 PANTHER NITRATE REDUCTASE [NADH] 2 2 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00651 Gma-Chr13 20186185 20188199 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00651 145 223 NADPH P450 reductases AT5G48810 45.000 9.27e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00651 K10534 - gmx:100818103 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00651 13 20186185 20188199 Gma13g00651 13 20186185 20188199 ECH