Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00641 ATGGATGAAAACCCTAACCCCTCAATCCCTCGCGCCTCTTCCTCTTCCTCTCAGGAATTCCTCAAACAAGTCCAAGCTGCCCTAAAGCGCCATCGCCCTCTCGGTACTACGCAATCGCATAACGTGAGGCCGAAGCGCGCCATGGTGGCTCTACGAAAGGCCACGAACAAGCTCGAGGAGGATCCGCCGTCGATCTCCGACACGTGCACCGGCGAAGGCTGCAAAAATGAGCCCTCTTTGCTGCTGGAATCTCTGAGTGTTGGTGCACACAACAAGGTTCAGTTTTTAACTGAGATCAACAATGCCACTGCACAGCCGCAGGATGAAGCATCGATTGGATTCAATCAACATGAGAAGCACCAAAATATGCAGCAGGCAGAATCTGAAACTAGCTTGGTATCTGAGGGAGGCAAGACTTCTATGCTGCCAAAAAGAACAATAGTTACTCAAGATCATCTGCAGCAATTCAAAAACTTTTTGAGGCAACCAGCTACACAATCTTCTGTAGTGGGATTGCCATGTCCTACAACTACGTCAGTCCATTCAACTTCAGCTCCAATGCTGAATTCTATAACTCATTCGAATTCCTGTATAGATAGTGGTTCACATGTGGCTGCAGAACCTTATGGGAACCTGAATGTTAATTCTCGTCCTATAATTCAAGGGTATGTTAAATCACCAAATATTTCTCTGAAAGACACCAATAGAATGTCAATTGATCAGGTGGCAAGTGCAGTCCAAGATTGTAATTCACCAATTGATGCAGAGTTGACGTTTAAGCAGAGTGACCCATCTAAGGAGCAGCAAGGATGTATGTTAAAGGATACAAGTATTTCAAAGTATACCTCTTGTCATGATGACTTGTTAAGTAAAGGGCAAGAGTCTGCAGCTGTTACCAACATACAGCCTCAGGTTCTCACTTCATCTTCAGATTTGAAATTGGAGTCTTCTAAGTTAGAAAAGCAAGAGAAAAATACAAGTTCTAAAGCATCATCAGGCATTCGAAAGAGGGCCTATGACCCTGAATTGTTTTTCAAAGTCAGTGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTACACAAAGTGATTTCATCAGACTGTACAATCTATGCACTTAAAAAGATAAAATTAAAGGGTCGTGATTATGCCACTGCATATGGCTTTTGTCAAGAGATCGAGTATCTAAATAGGCTGAAAGGAAAGAATAATATTATCCAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGTTTGAGGGAGTCATAAATGGCTCCTTCAGTAATAAGGATGGTAGAGTCAAGGATGATGGATATATATACATGGTACTTGAATACGGGGAAATCGATTTGGCTCATATGTTGTCTCAAAAGTGGAGGGAACTGAATGGAAGCAACCAGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATTCATGAAGAACGTATTGTGCATTCTGACTTGAAGCCAGCTAACTTCCTCCTTGTCAAAGGTTCCTTAAAACTGATTGATTTTGGAATAGCCAAAGCAATCATGAGTGATACAACAAACATACAACGTGATTCACAGGTTGGTACACTAAGTTACATGTCACCAGAAGCATTTATGTGCAATGAGAGTGATGCAAGTGGAAACATCATAAAATGTGGTCGGCCATCAGATATCTGGTCCCTCGGCTGCATTCTTTATCAAATGGTTTATGGGAGAACACCCTTTGCAGATTACAGGACATTTTGGGCAAAATTCAAAGTTATAACTGATCCAAATCATGAAATTACGTACGAACCAGTTTCAAATCCATGGCTTCTGGATCTTATGAAAAGGTGTCTAGCATGGCATCGCAATGAAAGGTGGAGAATTCCTCAGCTACTCCAGCATCCTTTTCTAGTTCCTCCAGTTCCATGTCATTCATCTTCGTCCCAAGACCAAACCTTTAAATTGCTGCGACTTATATCTAAAACTTGCATAAATGACCCTGAAGCATCACAGCTCTGTTGTCAGCTCCAACAGCTGCTTGGTAATCCCATCAAATTAACAAGAAGGTGA 2094 0.4212 MDENPNPSIPRASSSSSQEFLKQVQAALKRHRPLGTTQSHNVRPKRAMVALRKATNKLEEDPPSISDTCTGEGCKNEPSLLLESLSVGAHNKVQFLTEINNATAQPQDEASIGFNQHEKHQNMQQAESETSLVSEGGKTSMLPKRTIVTQDHLQQFKNFLRQPATQSSVVGLPCPTTTSVHSTSAPMLNSITHSNSCIDSGSHVAAEPYGNLNVNSRPIIQGYVKSPNISLKDTNRMSIDQVASAVQDCNSPIDAELTFKQSDPSKEQQGCMLKDTSISKYTSCHDDLLSKGQESAAVTNIQPQVLTSSSDLKLESSKLEKQEKNTSSKASSGIRKRAYDPELFFKVSGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKNNIIQLIDYEVTDKALFEGVINGSFSNKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWRELNGSNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDASGNIIKCGRPSDIWSLGCILYQMVYGRTPFADYRTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLAWHRNERWRIPQLLQHPFLVPPVPCHSSSSQDQTFKLLRLISKTCINDPEASQLCCQLQQLLGNPIKLTRR 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00641 697 Gene3D Transferase(Phosphotransferase) domain 1 466 648 - -
Gma13g00641 697 CDD PKc_Mps1 350 645 - -
Gma13g00641 697 Pfam Protein kinase domain 352 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00641 697 PANTHER MIXED LINEAGE PROTEIN KINASE 8 694 - -
Gma13g00641 697 MobiDBLite consensus disorder prediction 1 22 - -
Gma13g00641 697 ProSiteProfiles Protein kinase domain profile. 352 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00641 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Gma13g00641 697 SMART serkin_6 352 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00641 697 SUPERFAMILY Protein kinase-like (PK-like) 347 652 IPR011009 -
Gma13g00641 697 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 8 694 IPR027084 GO:0004712|GO:0007093|GO:0051304
Gma13g00641 697 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Gma13g00641 697 Gene3D Phosphorylase Kinase; domain 1 345 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00641 Gma-Chr13 20023976 20030709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00641 358 646 MAP Kinase Kinase Kinase AT4G08470 29.431 1.69e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Gma13g00641 Pkinase 2.9e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00641 K08866 - gmx:100795003 1370.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00641 13 20023976 20030709 Gma13g00641 13 20023976 20030709 ECH