Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00620 ATGGAGTGTTGTAAGAGGGTATATGAGTGGTTATGCAATTCAAAATCATACTTGATAATATTGAGCTTGCAATTTGGCTCCGCCGGCATGTACCTTATCACCATGGATGCTCTCAATAAGGGCATGAGTCATTATGTGTTTGTCGTTTACCGCAATGTCATCGCCACTATTGCTCTTGGCCCTTTCGCATTTTTTCTTGAAAGGAAAGTTAGGCCCAAGATGACAGTTCGGATATTTTCAGAAATTATGGCAGTGGCTTTTGTCGAGATAATACTTGATCAATGCTTCACGTTCCTTGGTATGAAGTACACATCAGCATCATTTGCGTCTGCTGTGATGAATTCTGTACCCTCCATTACCTTTGTACTCGCAATCATTTTTCGATTGGAGAGCATGAACTTGAAGGAGCTAGGATGTTTAGCCAAAGTGATTGGCACTGCAGTTAGTCTTGGAGGTGCTTTTCTAATGGCTCTGTACAAAGGTCCTGTTGTTAACATTGCAGACTCTTCTGCCAGCCACGTGGGACGGCCTGATAATGTGAACGACCCTTCTGGCAGTCACTGGCTTATTGGTGCTTGTTTTCTCCTCATAGGTTGTGCTGGCTTCTCTGCTTTCTACATATTGCAAGCTATAACATTGAGAAAGTACCCAGCAGAGATGTCCCTAGCCACCTGGGTTTGCTTTGTAGGTGCACTTCAAAGCAGCGCAGTTAGTTTTTTCATGGAACGCAATAGCCCTCATGTCTGGTCTCTAGCATGGGATTCTAGGCTTGTAGCTTATGCATACTCGGGAATAGTAACATCAGCAATCCAATTTTACGTGCAAGGCATGGTTATTAAAACCACGGGGCCAGTGTTTGTGACTGCATTTAATCCCCTGCGTATGATCATAGTCACGGCCTTGGCCTGCATTGTTCTCTCAGAGAAACTCCATCTTGGAAGCATTATTGGAGGAGTAGTGGTGGTAATTGGTCTCTATCTAGTAGTGTGGGGCAAAGCTAAAGAACAGAAACATCTCATGCCACCATCCCCTGAAAAGGTCACCCTGCAACGCCATCAACAGCTACCAGTTACTGTACCCATAAGTGATGATGCAAATGATAATAACAAACCTCAATTGGTCATAATTGAAGATAGAAACATTGGGCCAGAACATTGA 1158 0.4378 MECCKRVYEWLCNSKSYLIILSLQFGSAGMYLITMDALNKGMSHYVFVVYRNVIATIALGPFAFFLERKVRPKMTVRIFSEIMAVAFVEIILDQCFTFLGMKYTSASFASAVMNSVPSITFVLAIIFRLESMNLKELGCLAKVIGTAVSLGGAFLMALYKGPVVNIADSSASHVGRPDNVNDPSGSHWLIGACFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFVGALQSSAVSFFMERNSPHVWSLAWDSRLVAYAYSGIVTSAIQFYVQGMVIKTTGPVFVTAFNPLRMIIVTALACIVLSEKLHLGSIIGGVVVVIGLYLVVWGKAKEQKHLMPPSPEKVTLQRHQQLPVTVPISDDANDNNKPQLVIIEDRNIGPEH 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00620 385 PANTHER WAT1-RELATED PROTEIN 11 363 - -
Gma13g00620 385 Pfam EamA-like transporter family 27 156 IPR000620 GO:0016020|GO:0016021
Gma13g00620 385 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020|GO:0016021
Gma13g00620 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Gma13g00620 385 PANTHER WAT1-RELATED PROTEIN 11 363 IPR030184 GO:0016021|GO:0022857
Gma13g00620 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00620 Gma-Chr13 19611913 19617721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00620 15 358 Nodulin-like Gene Family AT1G44800 45.665 3.23e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00620 - - gmx:100813852 716.842