Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00599 ATGGAATGCAAGAAACAAGGAGAAGACATTCATGTTATTCCTGCGTTCTACAAAATAGACCCATCTCAGGTACGCAAACAGAGTGGCAGTTATCATGCGGCATTCGCAAAACACGAGAAGGATAGGAAGGTGAGTGAAGAGAAGATGCAAAAGTGGAAGAACGCTCTCTATGAAGCAACCAATTTATCTGGCTTCCATTCTAACGCATACAGGACTGAATCTGACATGATTGAAGAAATTGCCAGAGTTGTTTTGCAAAAACTAAATCACAAAAACTACCCAAATGACTTCAGAGGTCATTTCATATCAGATGAAAACTGTTCGAACATTGAATCTTTACTGAAAATTGAGTCAGAGGAAGTTCGAGTCATTGGAATTTGGGGCATAGGGGGTATTGGTAAAACAACTCTAGCTGCTGCTATTTTTCATAAGGTTTCTTCTCATTATGAAGACACTTGTTTCTCAGAAAATATGGCAGAGGAAACAAAAAGGCATGGCCTAAATTACGTATACAACAAACTTCTTTCTAAGTTACTAAAGAAAGATCTTCATATTGACACTCCTAAGGTGATACCCTATATTGTTAAGAGAAGACTCATGAATAAGAAAGTTCTTGTCGTAACAGATGATGTGAATACCTCAGAAGGTAGCAGAGTCATTGTGACAACCAGAGATAAGCATGTACTTATGGGTGAAGTTGTTGACAAAATTCATCAAGTTAAGAAAATGAACTTCCAAAACTCCCTTGAACTTTTCAGCATAAATGCCTTTGGCAAAACCTACCCTAAAAAAGGTTATGAGGAGTTATCAAAAAGAGCAGTGGAGTATGCGGGCAATTTTTCTGCAGATATAGGGACAAGAAGTCTTTTAGACAAAGCTCTTATCTCTATTACTTCAGATGGTGATCACGTAGATATGCACGATCTAATACAGCAGATGGGTAGAGAAGTTGTTCGTCAAGAATCAATCGAAAATCCTGGGCAACGCAGTAGATTGTGGAATCCTGAGGAAGTCTATGATGTATTGACAAATAATAGAGGAAATGGTGCAGTTGAAGGAATATGTTTAGATATGACTCAAATTACATATATGAATTTAAGCTCTAACGCATTCAGAAAGATGTCAAACCTTAGATTACTTGCTTTCAAATCCTATCAAGACTTTGAGATAATTAATTCAGTGTACCTTCCAAAGGGTCTCGAATGCTTACATAAAAGCTTAAGATATTTTGAGTGGGATGGATATCCATTGGAATCTCTACCGTCAACTTTTTGCTCTGAGAAGCTTGTTGAGTTTTCCATGCCCTACAGCAATGTGAAAAAACTTTGGCATGGAGTACAGAATTTGCCAAATTTTAAAAAGAAAATATTCTTAGGGGCTCGAAACACCTTATGGATTGGTGAATGCAAAATGCTTCAACATATATCTGCACTTCCACCATTCATTCAGTCCTTTGACGTCTGGAACTGCCATTCTCTTCAGACAGTGTTAAATGCCATTAATAGGATCAAACTTAGAACCAAACCATTGTCAGCAGTATCACTAGAAAATGAAGAAGTGCATCATCGGAAAATGTCGACGGTGATTTTCAATTAA 1596 0.3734 MECKKQGEDIHVIPAFYKIDPSQVRKQSGSYHAAFAKHEKDRKVSEEKMQKWKNALYEATNLSGFHSNAYRTESDMIEEIARVVLQKLNHKNYPNDFRGHFISDENCSNIESLLKIESEEVRVIGIWGIGGIGKTTLAAAIFHKVSSHYEDTCFSENMAEETKRHGLNYVYNKLLSKLLKKDLHIDTPKVIPYIVKRRLMNKKVLVVTDDVNTSEGSRVIVTTRDKHVLMGEVVDKIHQVKKMNFQNSLELFSINAFGKTYPKKGYEELSKRAVEYAGNFSADIGTRSLLDKALISITSDGDHVDMHDLIQQMGREVVRQESIENPGQRSRLWNPEEVYDVLTNNRGNGAVEGICLDMTQITYMNLSSNAFRKMSNLRLLAFKSYQDFEIINSVYLPKGLECLHKSLRYFEWDGYPLESLPSTFCSEKLVEFSMPYSNVKKLWHGVQNLPNFKKKIFLGARNTLWIGECKMLQHISALPPFIQSFDVWNCHSLQTVLNAINRIKLRTKPLSAVSLENEEVHHRKMSTVIFN 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00599 531 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 277 459 IPR044974 GO:0006952
Gma13g00599 531 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 277 IPR044974 GO:0006952
Gma13g00599 531 Gene3D Ribonuclease Inhibitor 321 522 IPR032675 -
Gma13g00599 531 PRINTS Disease resistance protein signature 123 138 - -
Gma13g00599 531 PRINTS Disease resistance protein signature 372 388 - -
Gma13g00599 531 PRINTS Disease resistance protein signature 198 212 - -
Gma13g00599 531 ProSiteProfiles TIR domain profile. 1 88 IPR000157 GO:0007165
Gma13g00599 531 Coils Coil 35 55 - -
Gma13g00599 531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 279 IPR027417 -
Gma13g00599 531 Pfam Leucine Rich Repeat 428 447 IPR011713 -
Gma13g00599 531 Pfam TIR domain 1 91 IPR000157 GO:0007165
Gma13g00599 531 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 277 459 - -
Gma13g00599 531 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 277 - -
Gma13g00599 531 Gene3D - 85 237 IPR027417 -
Gma13g00599 531 SUPERFAMILY L domain-like 342 506 - -
Gma13g00599 531 Pfam NB-ARC domain 111 275 IPR002182 GO:0043531
Gma13g00599 531 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 65 IPR035897 -
Gma13g00599 531 Gene3D - 1 84 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00599 Gma-Chr13 19116319 19119389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00599 8 445 WRKY Transcription Factor Family AT4G12020 31.679 2.75e-60 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00599 - - ahf:112777818 406.371