Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00598 ATGTCCGATTCGAAGGTCGAAACCATCGCCAGATTAGCCCAATGGAAAATCGACAACTTCGGACCCTGCTCCTTCAAGAGATCAGATCCTTTCAAGCTCGGAATTTGGAACTGGTTCATGTCCATAGAGAGGAACAGGTACCTCTACATACACATCTTTCCAGAGCCTTCTCGGCTTTCTAAGGAACAGCCACCCGTGGCGCGCTTCATCCTGCGAGTCTCCAATAGCTCTGGCCCTACCCGCAAAGTTTACATTTCCCCTGTTCATGAAAGGGTTCTTCGGACAAGTGAGGACTTTGTCTGGCCTGTTGATACTGCATTCCTTGGTCGCTTCGTTATTGATATTGAGTTTCTTGACTTGAGGACCTGCCCTGTGAATGGTGAAACCAGATCTGTTTGGCCATCTGATGGAAAACTGCAAACTGTTGCAGCTCAAAGCACTCTTCGATGCCTGTCTCACATGCTTGATGAGGCTATACATGCTGACCTCACCATTATCACCGCAGATGGTACTCTGAGGGCTCATAAGGCAGTTTTATCTGCTAGTTCTACTGTGTTGCATAGCTTGTATCTTGACAATGGTGATGAAAAAGAGACATCTACTATCAACATGGAAGATATGTCTCAAGAGTCCTGCATGGCCCTTCTGAGTTACTTGTACGGCACTATAAAACAAGAAGATTTCTGGAAACACAGGCTTGCATTGCTTGGAGCAGCCGATAAATACGAGATTGGAGATCTTAAAGATGCCTGTGAGGAAAGCCTACTGGAAGATCTTAACTCGGGAAATGTTCTGGATAGGTTAAATGATGCTTGGCTTTACCAGTTGCAAGCGTTAAAGAAAGGATGTTTCTCATACTTATTTTATTATGGTAAGATTTATGATGTTAGAGACGAAATGGATACCTTTTTCCGACATGCAGATAGGGAGCTAATGCTGGAGATGTTTCAGGAAGTGCTTACAATTTCGAAATAG 975 0.4431 MSDSKVETIARLAQWKIDNFGPCSFKRSDPFKLGIWNWFMSIERNRYLYIHIFPEPSRLSKEQPPVARFILRVSNSSGPTRKVYISPVHERVLRTSEDFVWPVDTAFLGRFVIDIEFLDLRTCPVNGETRSVWPSDGKLQTVAAQSTLRCLSHMLDEAIHADLTIITADGTLRAHKAVLSASSTVLHSLYLDNGDEKETSTINMEDMSQESCMALLSYLYGTIKQEDFWKHRLALLGAADKYEIGDLKDACEESLLEDLNSGNVLDRLNDAWLYQLQALKKGCFSYLFYYGKIYDVRDEMDTFFRHADRELMLEMFQEVLTISK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00598 324 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
Gma13g00598 324 SMART BTB_4 161 259 IPR000210 GO:0005515
Gma13g00598 324 PANTHER OS08G0495500 PROTEIN-RELATED 1 324 IPR044714 -
Gma13g00598 324 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Gma13g00598 324 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Gma13g00598 324 Gene3D Potassium Channel Kv1.1; Chain A 135 288 IPR011333 -
Gma13g00598 324 SUPERFAMILY POZ domain 144 257 IPR011333 -
Gma13g00598 324 PANTHER OS08G0103600 PROTEIN 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00598 Gma-Chr13 19109909 19115252 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gma13g00598 BTB 1.2e-19 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00598 K10523 - gmx:100786905 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00598 13 19109909 19115252 Gma13g00598 13 19109909 19115252 ECH