Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00594 ATGGAGTACGGGTTCCCGTTGGGTCTTCTTCCCAAGGGAGCCATAGGGTATTCGCTTAACAAAGACAACGACGAGTTCACAGTGTATTTCCAAGGAGTGTGCAGCCTCGACATAGAAGCCTACATGCTCAATTGGGAAGCATGTCCAAAACCAATAGATGGCTTATGGGCCCCTTGGTGGTATAAAACTGTACACAAATCTACTGGCTTTAAGGAAGAAAACAAGTATCCTCAGGTGGTTGGAGGACGTTCTTCATGTAACTCTGGCAAAGGCAATAGCAATCATTCCTCAGTCAAGTATGGTTATAGCCTAGTTAAAGGTAAAGCAAACCACCCGATGGAGGACTATCACGTAGCAAAATTTGTCCAGTTCAAAGGGCGAGAGCTTGGGCTTTTTGCTATATATGATGGACACCTGGGTGACAGTGTACCGGCCTATTTACAAAAGCATATGTTTTCTAACATCTTGAAGGAAGAGGACTTCTGGAATGATCCATTCATGTCCATTTCTAATGCATATGAGACAACAAATCAGGAAATTCTTTCTCACAGGCAGGGAGGGGTGGCTGGACAGATGTCAATTGATCATGAACCCAATATTGAGCGGGGCAGCATTGAGACCAGAGGCGGCTTTGTCTCAAACATGCCAGGTTCTTTAATTAACCATGTGTTCTATGAGTTGTTGCTTTAG 690 0.4435 MEYGFPLGLLPKGAIGYSLNKDNDEFTVYFQGVCSLDIEAYMLNWEACPKPIDGLWAPWWYKTVHKSTGFKEENKYPQVVGGRSSCNSGKGNSNHSSVKYGYSLVKGKANHPMEDYHVAKFVQFKGRELGLFAIYDGHLGDSVPAYLQKHMFSNILKEEDFWNDPFMSISNAYETTNQEILSHRQGGVAGQMSIDHEPNIERGSIETRGGFVSNMPGSLINHVFYELLL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00594 229 Gene3D - 1 48 IPR036758 -
Gma13g00594 229 Pfam Protein of unknown function, DUF538 2 39 IPR007493 -
Gma13g00594 229 ProSiteProfiles PPM-type phosphatase domain profile. 99 229 IPR001932 -
Gma13g00594 229 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 74 183 - -
Gma13g00594 229 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 185 217 - -
Gma13g00594 229 SUPERFAMILY At5g01610-like 2 43 IPR036758 -
Gma13g00594 229 Pfam Sulfotransferase domain 36 79 - -
Gma13g00594 229 Gene3D - 72 204 IPR036457 -
Gma13g00594 229 PANTHER PROTEIN PHOSPHATASE 2C 74 183 IPR015655 GO:0004722|GO:0006470
Gma13g00594 229 PANTHER PROTEIN PHOSPHATASE 2C 185 217 IPR015655 GO:0004722|GO:0006470
Gma13g00594 229 SUPERFAMILY PP2C-like 93 218 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00594 Gma-Chr13 19040019 19043116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00594 79 219 PP2C-type Phosphatase Gene Family AT1G34750 57.143 1.45e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00594 K17506 - gmx:100776795 254.218