Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00593 ATGGAGCTTGTGAATAGCCAAAAGCTAAAACAACATGAGCAGCAACAGCATTTTCATGTGTTGGTGGTAGATGATAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTCCTAAGAGATTCTTCATGCAAAGCTACCTTTGTGGATTCTGGAGACAAGGCTTTGAAATTTCTTGGCCTGCTTGATGATGACCTTGATAATTCTTCCTCAACTTCTTCGGAATCATTGCAACTAAACGGAATCAAAGTGAATATGATCATGACAGACTACTGCATGCCAGGAATGAGTGGCTATGATTTACTCAAACGAATCAAGCTGCAGGGATCTTCTTGGAAAGATGTGCCCGTGGTCATAATGTCATCAGAAAACGTACCATCTAGAATCAGCATGTGCTTGGAAGGAGGGGCAGAGAAGTTTCTATTGAAGCCTCTTCAGCAATCAGATTTAGAAAAGCTTCAGCCATGCTTTCTCAAATCCTCTGATAATTCTAGTGAACAAGACCAATCTGCTGAAAGATCTGTAGCTTCTCACGATAATGACAATTATATCGATACCATTAAGGCATTGTGTCCGGAGCATGGTTTTAAACTGCAATTTGTATCGACAATTGCAACTACAATATTGCGATTTTGGAAGTCTCTATAG 642 0.4034 MELVNSQKLKQHEQQQHFHVLVVDDSVIDRKLLERLLRDSSCKATFVDSGDKALKFLGLLDDDLDNSSSTSSESLQLNGIKVNMIMTDYCMPGMSGYDLLKRIKLQGSSWKDVPVVIMSSENVPSRISMCLEGGAEKFLLKPLQQSDLEKLQPCFLKSSDNSSEQDQSAERSVASHDNDNYIDTIKALCPEHGFKLQFVSTIATTILRFWKSL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00593 213 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 7 181 - -
Gma13g00593 213 Gene3D - 19 192 - -
Gma13g00593 213 SMART REC_2 18 152 IPR001789 GO:0000160
Gma13g00593 213 SUPERFAMILY CheY-like 18 150 IPR011006 -
Gma13g00593 213 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 181 IPR045279 GO:0009736
Gma13g00593 213 Pfam Response regulator receiver domain 20 150 IPR001789 GO:0000160
Gma13g00593 213 ProSiteProfiles Response regulatory domain profile. 19 156 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00593 Gma-Chr13 19018530 19022447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00593 13 175 Response Regulator Gene Family AT2G41310 54.545 5.62e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma13g00593 Response_reg 3.9e-18 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00593 13 19018530 19022447 Gma13g00593 13 19018530 19022447 ECH