Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00582 ATGCCAAAACCAGATAAGGTTATGATTGTTGAAAGAGTAATTGAGTCCTTAGGACTTCAGGCAGTGAGGGATTCCCTTGTTGGGACAGTAGAGAAGAGAGGTATATCTAGAGGGCAACGAAAGCGTGTAAATGTAGGGATGGAGATGGTTATGGAGCCTTCATTATTAATCTTAGATGAGCCTATAACTAGCCTAGACAGTGCATCTTCCACTTTACTACTTAAAGCACTTCGTCGCGAAGCACTTGAAGGTGTAAATATATGCATGGTACTTCGCCAACCTGAAGTagctccatcggagtttgtaggccttggatcttcttcatcaatggagtcatttgcttcttga 348 0.3477 MPKPDKVMIVERVIESLGLQAVRDSLVGTVEKRGISRGQRKRVNVGMEMVMEPSLLILDEPITSLDSASSTLLLKALRREALEGVNICMVLRQPEVAPSEFVGLGSSSSMESFAS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00582 115 Pfam ABC transporter 10 62 IPR003439 GO:0005524
Gma13g00582 115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 97 IPR027417 -
Gma13g00582 115 Gene3D - 1 101 IPR027417 -
Gma13g00582 115 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 95 - -
Gma13g00582 115 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00582 Gma-Chr13 18816473 18816820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00582 24 79 Calmodulin-binding Proteins AT2G36910 37.931 7.74e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00582 - - gmx:100812387 159.844