Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00569 ATGAGTTTGAGATATGGCAGTGTGGTCTTGGTTGCTTTAGTGCTTCTGCCACACATGGCTTCTGCTGCTTCAATTGTGAAGAACCTACCGGGTTACAAGGGTGATCTTCCATTCAAACTTGAAACTGGGTACATAGGAGTGGGAGAAGAAGAAGAGGTGCAAATATTTCACTTATTTGTGGAGTCTCAGAGAAATCCATTCATTGATCCACTGTTAATTTGGTTTGTTGGAGGTCCTGGTTGCTCTGCCCTATCTGCGTTCTTTTTTGAAAATGGGCCTTTAGTAATGAATGAGAATTACAATGGAAACCTTCCAAAACTTGAGTTGAACCCATATTCATGGACACACACGTTGAATATGATATACATAGACATGCCAGTAGGCACAGGATTTTCATACTCAGAAACGCAAGAAGGCTATTACAGTAGTGACATACTCTGGGTGAAGCATACTTACGAATTTCTACAGAAGTGGTTTATTGATCATCCAAAGTTTAGCTCAAATCCTTTTTACATTGGTGGTGGCTCATATTCAGGAATGATCACTGGTCCTCTTGTTCAACAAGTATATGAAGGATACAAAGCAAGACGCAAGCCACTCATGAACATCAAAGGTTATGTACTCGCGAGCCCAGCTGTTGACGGGTTTCGAGAGCAGAACATGAAAGTTTTATATGCATACCAAAGGAGTCTTATACCAGAAGCGCTCTACAAGCTTGTTCGTTACATAAACGAACAACAAATTATGGAACCTCTTTGTATTACTACGCCTGGCGTGAATCGAGAAATCCTACAAGAAGTTCAAGATCCTCCAACATTTTGGTGTAGAAGCTATTATCATATCCTTGTTGACACATGGGCAAATGATGAAAATGTGCGGAAGGCCCTTCATGTAAGAGAGGGAACTAAAGAGGAATTCCTGAGATGCAACAGAACCATGGCATACACCACAACTCGGCTAAACACAGTAGAATTTTATCGGAATCTCACTAATGCCAATCTCGAAGCTCTCGTTTACTGTGCTGATCTTGATATGAATGTACCACACCTGGGTACACAATATTGGATCAATTCATTCAACACGAGCATACGTGACAAATGGCGTGCATGGTTTGTTGACGGTCAAGTGGCTGGATACACAGAAGTCCACAAAACGAAAGAAGACCACTACTTAACATATGTGATCGTGAAGGGCGCTGGACATGTGGCCCAGACATTTAAACCCAAGGAAGTTTATCATTTGATCAATAGATGGTTTTCATTTTCTCTTATTTAA 1275 0.4102 MSLRYGSVVLVALVLLPHMASAASIVKNLPGYKGDLPFKLETGYIGVGEEEEVQIFHLFVESQRNPFIDPLLIWFVGGPGCSALSAFFFENGPLVMNENYNGNLPKLELNPYSWTHTLNMIYIDMPVGTGFSYSETQEGYYSSDILWVKHTYEFLQKWFIDHPKFSSNPFYIGGGSYSGMITGPLVQQVYEGYKARRKPLMNIKGYVLASPAVDGFREQNMKVLYAYQRSLIPEALYKLVRYINEQQIMEPLCITTPGVNREILQEVQDPPTFWCRSYYHILVDTWANDENVRKALHVREGTKEEFLRCNRTMAYTTTRLNTVEFYRNLTNANLEALVYCADLDMNVPHLGTQYWINSFNTSIRDKWRAWFVDGQVAGYTEVHKTKEDHYLTYVIVKGAGHVAQTFKPKEVYHLINRWFSFSLI 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00569 424 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Gma13g00569 424 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Gma13g00569 424 PRINTS Carboxypeptidase C serine protease (S10) family signature 391 404 IPR001563 GO:0004185|GO:0006508
Gma13g00569 424 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Gma13g00569 424 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 236 421 - -
Gma13g00569 424 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 8 239 - -
Gma13g00569 424 Gene3D - 275 422 - -
Gma13g00569 424 Gene3D alpha/beta hydrolase 19 269 IPR029058 -
Gma13g00569 424 Pfam Serine carboxypeptidase 30 242 IPR001563 GO:0004185|GO:0006508
Gma13g00569 424 Pfam Serine carboxypeptidase 243 420 IPR001563 GO:0004185|GO:0006508
Gma13g00569 424 SUPERFAMILY alpha/beta-Hydrolases 26 420 IPR029058 -
Gma13g00569 424 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 236 421 IPR001563 GO:0004185|GO:0006508
Gma13g00569 424 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 239 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00569 Gma-Chr13 18517222 18532185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00569 18 49 Calmodulin-binding Proteins AT2G22960 62.500 1.51e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00569 K16296 - gmx:100798023 547.74