Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00547 ATGGACTCATTGTTACTTCTAAAAGAAATTGCCACTTCCATTTTGATCTTCTTGATCACTCGTCTCTCCATTCAAACATTCCTCAAAAGCTATCGCCAGAAACTCCCACCGGGGCCAAAAGGGTGGCCAGTTGTGGGTGCACTCCCTCTCATGGGAAGCATGCCTCATGTCACCTTAGCAAAGATGGCAAAAAAATATGGACCTATAATGTACCTCAAAATGGGCACTAACAACATGGTTGTGGCCTCTACTCCAGCTGCTGCTCGTGCCTTCCTCAAAACCCTTGATCAAAACTTTTCAAACCGGCCCTCCAATGCTGGTGCAACCCATTTGGCTTATGATGCACGGGATATGGTGTTTGCTCATTACGGATCACGGTGGAAGTTGCTAAGAAAACTAAGTAACTTGCACATGCTTGGAGGAAAGGCACTTGATGATTGGGCCCAAATTCGAGATGAAGAGATGGGGCACATGCTTGGTGCAATGTACGATTGTAACAAGAGGGATGAGGCTGTGGTGGTGGCGGAGATGTTGACATATTCAATGGCCAACATGATTGGCCAAGTTATATTGAGTCGTCGAGTGTTTGAGACAAAGGGTTCGGAGTCTAACGAGTTCAAGGACATGGTGGTTGAGCTCATGACCGTTGCTGGTTACTTCAACATTGGTGACTTCATACCCTTTTTGGCCAAGTTGGACTTGCAAGGCATAGAGCGTGGCATGAAGAAGTTGCACAAGAAGTTTGATGCGTTGTTAACGAGCATGATTGAGGAGCATGTTGCTTCTAGTCACAAGAGAAAGGGCAAGCCCGATTTCTTAGACATGGTAATGGCTCATCATAGTGAGAACTCCGATGGGGAGGAACTATCGCTCACCAACATCAAGGCACTACTCTTGAACCTATTCACCGCAGGCACCGATACATCTTCAAGTATAATAGAGTGGTCCTTAGCCGAGATGTTGAAGAAGCCCAGCATAATGAAGAAGGCTCATGAAGAAATGGACCAAGTCATAGGAAGGGATCGCCGTCTCAAAGAATCTGACATACCAAAGCTTCCATACTTCCAAGCCATTTGCAAAGAGACCTATAGAAAGCACCCTTCAACACCCCTAAACCTGCCTCGAATCTCATCTGAACCGTGCCAAGTGAATGGTTACTACATTCCCGAGAACACTAGGCTGAATGTGAACATTTGGGCCATAGGAAGAGACCCTGATGTGTGGAACAATCCTTTGGAGTTTATGCCCGAGAGGTTTTTGAGTGGGAAGAATGCCAAAATTGACCCACGTGGGAATGATTTTGAGCTTATTCCATTTGGTGCTGGGAGGAGGATTTGTGCAGGGACTAGGATGGGGATTGTGTTGGTTCACTACATTTTGGGCACTTTGGTGCATTCGTTTGATTGGAAGCTACCCAATGGGGAGAGGGAGTTAGACATGGAGGAGTCCTTTGGGCTTGCCTTGCAAAAAAAGAGACATCAAAATGGAGGACAACTTGATGCTCTTCGTGTTGAGTTGAAGAACAACTTGAAAGATAAAAAGTTTTTGCTTGTGCTCGATGACCTTTGGAATGAGAAGTATAATGATTGGCATCACCTAATAGCACCTTTTAGCAGTGGGAAAAAGGGAAGTAAGATTATTGTGACAACTCGACAACAGAAAGTTGCACAAATGACACATACATATCCCATTTATGAGCTGAAACATCTAACAGATGAAAATTGTTGGTGTATACTTGCTGAACATGCTTTTGGAAATGAAGGTTACAATGAATATCCAATCCTAGAAGAAACTGGTAAGAAAATTGCAAAAAAATGCAATGGCCTACCTTTAGCTGCTAAAACATTGGGAGGTCTTTTGCGATCAAATGTTGATGAAAAGGAATGGGATCGAATTCTGAACAGCAACTTATGGGCACATGAAGAGGTTTTACCAGCTTTACACATAAGCTATCTTCATCTCCCAGCACATTTGAAAAGATGCTTTGCTTATTGCTCAATTTTCCCTAAACAACATTTATTGGATAGGAAGGAATTGATTCTGTTATGGATGGCTGAAGGCTTTCTTCAACAAATCCACGGAGAGAAAGCAATGGAATCAGTAGGTGATGAATACTTTAATGAATTATTATCAAGATCTTTAATTGAAAAGGACAATACTAAAGCAGAGGAAAAGTTTCGAATGCATGACCTCATCTATGATTTAGCTAAACTGATATATGGAAAAAGTTGTTGCTGCTTTGAAAGTGGTGAAATCTCAGGAACTGTTCGCCATTTAGCATTTCATTCAAATCTGTATGATGTCTCTAAAAGGTTTGAGGGCTTGTATGAGCAAAAGTTTTTGCGCACCTTTTTAGCAGCACGTAATTATTTATACGGTGAATATTGTGTTACAAAAAAGGTGTCACATGATTGGCTGCAAAAACTAAGATATTTGCGAACATTGTCCTTGCTTAAATATGAAAATATCACTGAGCTGCCGGAATCAGTAAGCATTCTGGTACTTTTGCGGTATCTTGACCTTTCCTATACTTCCATCAAAAGGTTGCCTGATGCAACCTGTAGGCTTTACAATTTGCTGACATTAAAATTATCACATTGTGAATTTCTTACTCAGCTTCCTGAACAGATTGGAAATTTGGTCAATTTACCCCACCTTGATATTAGAGACACAAATTTGTTGGCGATGCCAGCACAAATAAGCAAGCTACAAGATCTTCGTGTGTTGACTTCTTTCATTGTAGGCAGAGAAGATGGAGTAACTATTGGAGAGTTAAGAAAATTCCCTTACTTGCAGGGTATGCTTTCCATTTTGAAGCTACAAAATGTTGTTGATCCCAAGGATGCATTTCTAGCTGCCTTAAAGAAAAAGGAGCATATTGAGGAGCTTACACTGGAGTGGGGCAGTGAACCACAAGATTCATCAATTGAGAAATTTGTACTTAAGAACCTGCAACCATCAACAAATTTAAAGAAGCTCAACATCAGATCCTACAGTGGCACAAGCTTTCCTAAATGGTTGGGTGACTCTTCGTATTCTAATGTTATAGTCCTTTGCATTAGTGATTGCAACTATTGTTTTTCACTTCCACCATTTGGACAACTACCATCTCTTAAGGAGCTTGTGATTAAAAGCATGAAAATGGTGAAGACAGTTGGTGAAGAATTCTACTGCAACGATGGAGGCTCTCTTTCATTTCAGCCATTTCAATTGTTGGAGAGTATCGAGTTTGAAGAGATGTCAGAATGGGAGGAGTGGCTACAATTTGAAGGTGAAGGCAGCAAATTCCCTTTTCCTTGCCTTAAGCGTTTGAGTTTATCAAAGTGCCCCAAGTTGAGAGGAAACTTGCCCAAGCATCTACCTTCGTTGACAGAGATTAGTATAAAAGAGTGCAACCAGCTGGCAATTGAATCATGCCATCTGCACTGGAACACATCAATTGAATCAGTAAAAGTTTCTGAAGTGGGAGAAGGCTTGTTGTCCTTGCTTGACAACTTTTCTTATAGGGAACTATCTATTGAAAAGTGTGACAGCTTGTCATGTTTGCCAAGAATGATACTAGCTGCCAATTGTCTTCAAAAGTTAACTCTTGGAAATATCCCCACTTTGATTTCCTTCCCAGCTGAAGGCTTTCCAACGTCATTAAAAACTGTGAGAACTTAG 3663 0.4139 MDSLLLLKEIATSILIFLITRLSIQTFLKSYRQKLPPGPKGWPVVGALPLMGSMPHVTLAKMAKKYGPIMYLKMGTNNMVVASTPAAARAFLKTLDQNFSNRPSNAGATHLAYDARDMVFAHYGSRWKLLRKLSNLHMLGGKALDDWAQIRDEEMGHMLGAMYDCNKRDEAVVVAEMLTYSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTVAGYFNIGDFIPFLAKLDLQGIERGMKKLHKKFDALLTSMIEEHVASSHKRKGKPDFLDMVMAHHSENSDGEELSLTNIKALLLNLFTAGTDTSSSIIEWSLAEMLKKPSIMKKAHEEMDQVIGRDRRLKESDIPKLPYFQAICKETYRKHPSTPLNLPRISSEPCQVNGYYIPENTRLNVNIWAIGRDPDVWNNPLEFMPERFLSGKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVHYILGTLVHSFDWKLPNGERELDMEESFGLALQKKRHQNGGQLDALRVELKNNLKDKKFLLVLDDLWNEKYNDWHHLIAPFSSGKKGSKIIVTTRQQKVAQMTHTYPIYELKHLTDENCWCILAEHAFGNEGYNEYPILEETGKKIAKKCNGLPLAAKTLGGLLRSNVDEKEWDRILNSNLWAHEEVLPALHISYLHLPAHLKRCFAYCSIFPKQHLLDRKELILLWMAEGFLQQIHGEKAMESVGDEYFNELLSRSLIEKDNTKAEEKFRMHDLIYDLAKLIYGKSCCCFESGEISGTVRHLAFHSNLYDVSKRFEGLYEQKFLRTFLAARNYLYGEYCVTKKVSHDWLQKLRYLRTLSLLKYENITELPESVSILVLLRYLDLSYTSIKRLPDATCRLYNLLTLKLSHCEFLTQLPEQIGNLVNLPHLDIRDTNLLAMPAQISKLQDLRVLTSFIVGREDGVTIGELRKFPYLQGMLSILKLQNVVDPKDAFLAALKKKEHIEELTLEWGSEPQDSSIEKFVLKNLQPSTNLKKLNIRSYSGTSFPKWLGDSSYSNVIVLCISDCNYCFSLPPFGQLPSLKELVIKSMKMVKTVGEEFYCNDGGSLSFQPFQLLESIEFEEMSEWEEWLQFEGEGSKFPFPCLKRLSLSKCPKLRGNLPKHLPSLTEISIKECNQLAIESCHLHWNTSIESVKVSEVGEGLLSLLDNFSYRELSIEKCDSLSCLPRMILAANCLQKLTLGNIPTLISFPAEGFPTSLKTVRT 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00547 1220 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Gma13g00547 1220 Gene3D Cytochrome P450 25 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 Pfam Cytochrome P450 36 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 Pfam NB-ARC domain 488 634 IPR002182 GO:0043531
Gma13g00547 1220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 665 IPR027417 -
Gma13g00547 1220 PANTHER FLAVONOID 3'-MONOOXYGENASE 7 494 - -
Gma13g00547 1220 PANTHER CYTOCHROME P450 71B11-RELATED 7 494 - -
Gma13g00547 1220 SUPERFAMILY Cytochrome P450 36 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 Gene3D Ribonuclease Inhibitor 780 1217 IPR032675 -
Gma13g00547 1220 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00547 1220 Gene3D - 569 649 IPR042197 -
Gma13g00547 1220 SUPERFAMILY L domain-like 725 1217 - -
Gma13g00547 1220 Gene3D - 650 738 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00547 Gma-Chr13 18003508 18011276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00547 1 490 Cytochrome P450 AT5G07990 47.581 8.18e-163 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00547 K13083 - gmx:102664446 1456.43