Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00537 ATGGATAGAAGGCACTGTTACAAGGATTTGCTGCCTTTGGTGGTGCTTGTTGCCAACGAATGCAACAACACAGGCTTGTTCACTCTCTTCAAAGCAGCCACACTGCAAGGGATGAGCAACTATGTCTTTGTCACCTATGCCTATTCTGTTGCCCTTCTTGTACTCCTTCCTGTCACTTTTTTCTACAGAAGATCAAGAGTGGTTCCTCCACTCAGTTTTTCCATCTTATCCAAAATTGCTCTTCTTGGAGTGATAGGGAGTTCATCTCAGATCTTGGGCTATGCTGGCATCCGTTATAGTTCTCCCACACTTTCCTCTGCCATCAGCAACCTCACTCCTGCATTCACCTTCATGCTTGCTGTCATTTGCAGGATGGAAAAGATAGCTGTAAAACGTAGAACAACCCAAGCTAAGATATTGGGCAGCATAATATCAATATTAGGTGCATTTGTTGTGACTTTCTACAAAGGCCAATCGATCATCATAGCAGATAATTCCCCTTCCATTCAACTTCCACAATCAAATGGCATTCTTACTTCAGTGGATAGAAATTGGGTCATTGGTGGCCTTCTGCTCACAGCTTGCAATATACTACTTACTGTATGGTTCGTTTACCAGGTTGAAATCTTGAAGGAGTTCCCGGATGAACTAACTATGGTCTTCTTTTACAACTTGTGTGCAGCCATTGTAGCCTCAATTATAGGCTTATTAGGGGAGAAAAACTCAAGTGCTTGGAAAATAAGACCAGATATATCACTGATCTCTATTGTTTGCACTGGAATATTTAACAAGTTCCTGAGTAGTGCAATATATGCATGGGGAATACACTTAAAGGGCCCTGTATATGTAGCAATGTTCAAGCCTCTCTCAATTGTTATTGCGGTTGCCATGGGTGTTATGTTCCTTGGTGATTCTCTATATGTTGGAAGTATAATTGGAGCCACAATAATATCAATTGGGTTTTATACTGTGATGTGGGGCAAAGCAACTGAACAGAAGGAAGAGGAGGAGGAGGAGGAAAATGTTGGTAGCCAGGAATCGTCAATTACTGAGAACATTCCTCTTTTGCAAAGCTATATAACTGCAATCTCTATTGCTGTAATAGCTGCCATGATTTCTGCAAACAAGGCATGCTTGATGCCTTATATTAAAAGCAAAACAACCCATCATCCCACAGCCTGCCATGCCCGGGGATCCTCTGGCCACTCCATCCGTGTTACACTTAACCATTCCTTGAAAGGAGGGTACCAAGTGACCTGCATAATTTGCACTTTTCTAGGGTGGCAGATCACACCTAACTCTTTCAACTTGTTAAACTCATCAATTGATGAGAACATGGAGCTCTTTGAAAGGTCACCAGCAAGCTCTGATTGTTGTTGGTTCTGTAGGAATGCAAGAATCTTTCAAAATGAGATGTCCTCAGTGCAATCTATTTGTCATGAAATTAAGAACCATGTTGCTGATATAGTTCATTATAGCAAAGATCTTTAG 1491 0.4152 MDRRHCYKDLLPLVVLVANECNNTGLFTLFKAATLQGMSNYVFVTYAYSVALLVLLPVTFFYRRSRVVPPLSFSILSKIALLGVIGSSSQILGYAGIRYSSPTLSSAISNLTPAFTFMLAVICRMEKIAVKRRTTQAKILGSIISILGAFVVTFYKGQSIIIADNSPSIQLPQSNGILTSVDRNWVIGGLLLTACNILLTVWFVYQVEILKEFPDELTMVFFYNLCAAIVASIIGLLGEKNSSAWKIRPDISLISIVCTGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGVMFLGDSLYVGSIIGATIISIGFYTVMWGKATEQKEEEEEEENVGSQESSITENIPLLQSYITAISIAVIAAMISANKACLMPYIKSKTTHHPTACHARGSSGHSIRVTLNHSLKGGYQVTCIICTFLGWQITPNSFNLLNSSIDENMELFERSPASSDCCWFCRNARIFQNEMSSVQSICHEIKNHVADIVHYSKDL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00537 496 PANTHER WAT1-RELATED PROTEIN 8 359 - -
Gma13g00537 496 PANTHER WAT1-RELATED PROTEIN 8 359 IPR030184 GO:0016021|GO:0022857
Gma13g00537 496 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 329 - -
Gma13g00537 496 Pfam EamA-like transporter family 188 325 IPR000620 GO:0016020|GO:0016021
Gma13g00537 496 Pfam EamA-like transporter family 26 153 IPR000620 GO:0016020|GO:0016021
Gma13g00537 496 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00537 Gma-Chr13 17877080 17882926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00537 1 359 Nodulin-like Gene Family AT3G28050 50.136 1.53e-121 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00537 - - gmx:100811686 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00537 13 17877080 17882926 Gma19g00105 19 1091076 1094749 GST