Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00534 ATGATGAACACTGGGAGTTTGGGAGTTTTAGAAAACATTTGTCCTATCGCAAACGCAATACGCAATACGCAGCCCAACGATTTCACCAAAGCAAAGTCAGGCCCCAACTTGCAagggttcgcgatcgagctatacttagagccagcgctggagaatcaggttctgaaagcatggaacgttctggcgcggagacaaatcagcacagagctgatagaaatggagtctcggccacacataaccctattctcggcaccatttctagaaccttccaagctcgattctctcctaaaagtgttcgcctccaagcacgaccctctccctctcactttctcatccctcgccactttccccaacaacctcctcttcctcgccCCAACCCCTTCCCTCTCCCTCCTCCACTTTCAGTCACAGCTCTGTGACGCTATCAGAAAAGAAGGCATCGAAATCGCTCATGAATTTGCTTTCAATTCGTGGATCCCTTATTGCTCCGTTGCGCACCATGTCCCCCAAAACAGAATGCCTGAGGCTTTCTCACTCTTGAGGGAACTGAAGCTTCCGGTTTCCGGTTACGCTATGGATGTTGCGCTCGTACAGTTCTCTCCGGTTCGGGAAATCTTCTCGTTTGTGCTCGGCAACAACGTAGACTCGTGA 651 0.2965 MMNTGSLGVLENICPIANAIRNTQPNDFTKAKSGPNLQGFAIELYLEPALENQVLKAWNVLARRQISTELIEMESRPHITLFSAPFLEPSKLDSLLKVFASKHDPLPLTFSSLATFPNNLLFLAPTPSLSLLHFQSQLCDAIRKEGIEIAHEFAFNSWIPYCSVAHHVPQNRMPEAFSLLRELKLPVSGYAMDVALVQFSPVREIFSFVLGNNVDS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00534 216 PANTHER - 38 214 - -
Gma13g00534 216 Pfam 2'-5' RNA ligase superfamily 76 197 - -
Gma13g00534 216 SUPERFAMILY LigT-like 41 170 IPR009097 -
Gma13g00534 216 Gene3D Cyclic phosphodiesterase 40 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00534 Gma-Chr13 17847586 17848383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00534 38 216 Calmodulin-binding Proteins AT5G40190 60.773 1.52e-76 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00534 - - gmx:100777475 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00534 13 17847586 17848383 Gma19g00109 19 1137850 1138835 GST