Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00531 ATGCATGGGTGCTGTGGTGACCAGTCGAAACACAATCGGCACATGTGGCCTGTACCTGCCAACCCGACCACTGTAGCCATCGATTCTTCACCGTCTCAATTTAAATGCAAAGATGGACGCAAGATTCGTGCTGGTGATTGTGCACTTTTCAAGCCACCTAGGGACTCCCCTCCTTTCATTGGAATAATTCGCAAGTTAACATTTGACAAAGAAGAAAGTCCGAGTTTAGAAGTAAATTGGCTATACCGACCTGCTGATTTGAAGCTTGCTAAAGGGATTGTACTGGAAGCTGCTCCAAACGAAGTTTTTTACTCCTTTCACAAGGATGAAACACCTGCTGCATCCTTACTCCATCCGTGTAAAGTCGCATTTCTTCGTAAGGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTCGACGAGTATATGACATTGAGAACAATTGTTTATGGTGGCTAACCGATAAAGATTACCTTAATGAACGACAGGAAGAAGTTAACCAGCTATTAGACAAGACAAAACTAGAAATGCATGGGGCTGTGCAGTCAGGAGGCCGTTCTCCGAAGCCCTTGAATGGTCCAACATCAACGCAGTCATTGAAATCTGGTTCCGATAACGTTCAAAATAGTTCTTCCTTTGGTGCACAGGGTAAGGGGAAAAAAAGAGAGCGGGGTGATCAGGGTTCTGATTCATCTAAAAAGGAGCGGTTATTTAAGGTAGAAGATGGAGATTCTGGTCAATTCAGACCGGAGAGCATGTTAAAGTCTGAGATTGCTAAAATAACTGATAATAAAGGTGGGCTTGTGGACTTTGAGGCAGTTGACAGACTGGTACAACTTATGCAACCTGATAGTGGTGATAAAAAAATAGATTTGGCAGGGCGGATGATGCTTGTCGATGTAATTGCACTTACGGACCGGTATGAGTGTCTATGCGGGTTTGTACAGCACAGGGGTTTGCCTGTGTTGGATGAATGGCTGCAGGAGGTCCACAAGGGCAAAATCAGTGATGGAAATATGCCTAAAGAAAGTGATAAGTCCATTGACGAATTTTTGTTAGCTTTACTTCGTGCGTTGGATAAGCTTCCTGTGAACCTTCATGCACTGCAAACCTGTAATGTTGGAAAGTCTGTTAATCATTTACGCACCCACAAAAATTATGAAATTCAGAGGAAAGCTAGGAGTCTAGTGGATACATGGAAGAGACGTGTGGAAGCTGAAATGAATATGAATGATTCGAAGTCTGGTTCAAACCGTGCCATGTCTTGGCCAGCAAAGCCAGCAAATTCTGAGTCTCCTCATGTTGGAAATAGGAAAACAGGAGGAGGATCCTCTGATAATGTTGCAAAGAGCTCTTCAATTCAACCCTCAATATCTAAAAATTCCCAATCTAAGTTAAGTTCTGGAGAAGCATTGTCCAAGTCCTCTTCATCTCCTGGCTCAACTAAGTCAATGACTACCTCAGCGAGTGGTAACTCAAAAGATCAAAACAGTAAAGTCTTGGTTGGAGCCGCAGCGTCAGATCTGCCTCTGACACCTATCAAGGAGGAGAGGAGCAGCAGTTCTAGTCAATCTCAAAATAACAGTGTCTCTTGTTCTAGTGAACATGCTAAAGCTATTGGTTCTTGCAGGGAAGATGCGAAGAGCTCCACTGCAGTGTCAACGAGTGTGGGCAAAATTCCTGGTGGTGTGTCTCGAACTCGCAAATCAAGCAATGGTCTACATGGGGCTGGTGTTGCAGTAGGTCCGAAGGAGCACAGCTCTGCAAAAAATTCAGCTAAGAATTCACCTGCTGAAAAAGTTTCACCAACTCGAGTCTCCCATGAAAAATCAGCCGACCAGCCCCTTACTGATCAAGGGAATAATCAGCGATTAATTCTCAGGTTGCCAAACACTGGTCGTAGTCCTTCAAGGGGAGCTAGCGGTGGCTCATTTGAAGAACCAGGTATCATGTGCAGCAAAGCTTCGCCTCCTGCCGACAGGAATGAGAACCAGGACAGAAGAGTGAAAACTAAAACCGAGTGTTTGCTGACCCATGTGTCAAATATGATGAATGAAGCATGCGATGCTAGTGAAGCTTTGCTTGGTGTTGACGAAGGTAAGGGCCCTCCAATGTTCGATGAGCGATGCAGGGCTAATGAAGATGGTGATAAGGTAGAAGAAACATCAAAACCAACTAGTTTGTCATCTGGATTTGTTTCCAGATCAGGGCAGACTTATGATTTAAGCTCCATGAATGCATTAGTTGAAAGCTGTGTGAAGATTTCTGAAGCAAGTGCATCTGCGTCCCATGGAGATGATGGAATGAACCTACTAGCTACTGTGGCTGCAGGGGAAATATCAAGATCTGAAAATGCCTCACCCATGTCATCCCCTGAGAGAAAGTCTCTTCCTGCAGATGAATTGAGCTCAGCCAATGATTTCAAGTTAAAACATTCTGTTGAAGCAGCTGGTTGCACTGTTTCACAGTTGGATGGTGGGGCTATTGCAGAGCATCCTTTGAATACAGTTGATTCATTGCAGATAAAAAATGATTTGAGGCATCCTGCTACGACTTCAGGAGATGGTGAAGCCATTTCATCGAGTTGTGTAGAGAAAAGTGGTGATGGTAGATCTCAGATAAATAGCTCCCCTACAGATTTCTTACAAAATGCTGAAGGTCCATGCTTACGGCCTGAAATCAAAGAGGATACTTCTGAAACTATATTGCCAGATAAAAAGGAGACTAATGTAGACCTCGGAGGTTCTGACTCTAAATTAAAGTCATGCACTTCCTCTATTGATGATGATCAGAAGGTTGATCACATGAATGAGGGAACCATTGAGAATGAGGAATTGTTGGTTCCAAAAGCTGTTGCAAGTGTTAAGTCTGAAAATGAATCAGGTGAAAAGCAAGCTGAGTTATCCTCAGGCGTGGATAATGAGAACCAGATTTGTTCAGAAAAAGCAACAGGTACTGGTATACTAGTGCAAAAGGCCTCTCCAATTGCAGAAAACTGTGAGTCCTTATATTTAAAAAAGGAGTCACCTACTTCTGGTAATGCTGTAATGGTATCTAGGGATGAAAATGCTGATGACATGAAGTCAGTTGTGATTGAGCCTGATGAACGAAGAATGGAGCAGGATTTATCAGTTTCAGATGATGTTAATGAATGTGCTGAAGATACTATGGGCAGAAATGAGGCTATAGGTCAGTGTTCTGGCTCATCAGTTCAGCCAGATTTACCAACAATGCCTAGGAAAGAGAATGATGTGTTTAAAGCATGTGAGCGAAAGTTGGATGCAAATCAATCTGAGGTTGCAGGAGAGAGGCATGCAGGTTCTGCTGCTGGGTCTGATACTGCTGTAAAACTCGACTTTGATTTAAATGAAGGCTTTCCTGTTGATGATGTAAGCCAAGGGGAGATTGCTAGGCAGGAAGATCCTATCACATCATCTGCAGTTCATGTTCCTTGCCTATTGCCTTTTCCTATTTCGTCCATCTCTGGGGGCTTCCATGCTTCAATTACAGTGGCATCTGCTGCAAAGGGGCCTGTTGTTCCACCTGAAAACCCATTGCGGATTAAGGGGGAGCTTGGTTGGAAAGGGTCAGCCGCTACCAGTGCATTTCGGCCAGCTGAACCTAGGAAAAATGCTGAGACAGCATCCACTACTAATGATATTGCTTCTGTTGACGGCACTTCTATCAAACAAGGTCGCCCTCCCTTAGATTTTGACTTAAATGTGGCAGATGAAAGATGTTTTGAGGATGTTGGTTTGCGTGGTTCTTTAGAAGCTGGACCACTTGATCGTAGCACTGGGGGATTTGATCTTGATTTAAATAAAGTTGACGAGACTCCTGAAATTGGCACTTTCTCGCTAAGCAAACTGGAAATTCCTTCTTTACCTAGTAAGCCTTCGTTGTCCAGTGGGTTATCTAATGGTGGAAGTGTCTCAAGAGACTTTGACTTAAATAACGGGCCAGGCCTTGATGAAGTTGGCAGTGAAGTCCCTGCACGTAGTCAGCAGATGAAAAGTACTGTACCATTCCCAACTGCTGTCCATAGCACACGAACAAACAATGCTGAATTTGGGAATTATTCTGCATGGTTTCCTCCAGGCAATTCTTATTCTGCAATTACTGTCCCACCACTTCTGTCTGGTAGAGGGGAGCAGAGTTATGTTGCTGGTGCTGGGGCACAACGGATAATGGGTCCTACAGGTAGTGCTCCTTTTGGTCCTGAAATCTACAGAGGACCAGTGCTTTCATCCTCTCCAGCCGTTGCTTATCCACCTACTACACCTTTTCCCTATCCAGGATTTCCATTTGAAACCAATTTTCCATTATCTTCAAACTCCTTTTCTGGTTGTTCAACGGCATTTATGGATTCATCTACTGTGGGTGGATTATGCTTTCCTACCATGCCCTCACAGCCAGTTGGGCCTGGTGGTGTTGTTTCATCCACATATCCCCGTCCATATGTTATGAGTCTTCCAGGTGGTACAAGTAATGTGATTCCTGACAGCAGAAAATGGGCAAGTCAAAGTCTGGATCTTAATTCGGGCCCTGGTGAAAAGAACCTGATGGTGGTTGGGAGGGAGCCGAGAGATTCGGTTACAAACAAACTTCATGGCAGTAGTGCCATGGCTCTTCAACGCAAATATTCAAGAGCTATTTTGGAAAATGTCAGAAAAATTGGGGATATTATTTTGAGTGTTGAGCCATGGACAACAAGCAAAGATGCTACCCTTGTTGCTGATGTGCCTCTTCAGTTCTGA 4761 0.4405 MHGCCGDQSKHNRHMWPVPANPTTVAIDSSPSQFKCKDGRKIRAGDCALFKPPRDSPPFIGIIRKLTFDKEESPSLEVNWLYRPADLKLAKGIVLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIENNCLWWLTDKDYLNERQEEVNQLLDKTKLEMHGAVQSGGRSPKPLNGPTSTQSLKSGSDNVQNSSSFGAQGKGKKRERGDQGSDSSKKERLFKVEDGDSGQFRPESMLKSEIAKITDNKGGLVDFEAVDRLVQLMQPDSGDKKIDLAGRMMLVDVIALTDRYECLCGFVQHRGLPVLDEWLQEVHKGKISDGNMPKESDKSIDEFLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNYEIQRKARSLVDTWKRRVEAEMNMNDSKSGSNRAMSWPAKPANSESPHVGNRKTGGGSSDNVAKSSSIQPSISKNSQSKLSSGEALSKSSSSPGSTKSMTTSASGNSKDQNSKVLVGAAASDLPLTPIKEERSSSSSQSQNNSVSCSSEHAKAIGSCREDAKSSTAVSTSVGKIPGGVSRTRKSSNGLHGAGVAVGPKEHSSAKNSAKNSPAEKVSPTRVSHEKSADQPLTDQGNNQRLILRLPNTGRSPSRGASGGSFEEPGIMCSKASPPADRNENQDRRVKTKTECLLTHVSNMMNEACDASEALLGVDEGKGPPMFDERCRANEDGDKVEETSKPTSLSSGFVSRSGQTYDLSSMNALVESCVKISEASASASHGDDGMNLLATVAAGEISRSENASPMSSPERKSLPADELSSANDFKLKHSVEAAGCTVSQLDGGAIAEHPLNTVDSLQIKNDLRHPATTSGDGEAISSSCVEKSGDGRSQINSSPTDFLQNAEGPCLRPEIKEDTSETILPDKKETNVDLGGSDSKLKSCTSSIDDDQKVDHMNEGTIENEELLVPKAVASVKSENESGEKQAELSSGVDNENQICSEKATGTGILVQKASPIAENCESLYLKKESPTSGNAVMVSRDENADDMKSVVIEPDERRMEQDLSVSDDVNECAEDTMGRNEAIGQCSGSSVQPDLPTMPRKENDVFKACERKLDANQSEVAGERHAGSAAGSDTAVKLDFDLNEGFPVDDVSQGEIARQEDPITSSAVHVPCLLPFPISSISGGFHASITVASAAKGPVVPPENPLRIKGELGWKGSAATSAFRPAEPRKNAETASTTNDIASVDGTSIKQGRPPLDFDLNVADERCFEDVGLRGSLEAGPLDRSTGGFDLDLNKVDETPEIGTFSLSKLEIPSLPSKPSLSSGLSNGGSVSRDFDLNNGPGLDEVGSEVPARSQQMKSTVPFPTAVHSTRTNNAEFGNYSAWFPPGNSYSAITVPPLLSGRGEQSYVAGAGAQRIMGPTGSAPFGPEIYRGPVLSSSPAVAYPPTTPFPYPGFPFETNFPLSSNSFSGCSTAFMDSSTVGGLCFPTMPSQPVGPGGVVSSTYPRPYVMSLPGGTSNVIPDSRKWASQSLDLNSGPGEKNLMVVGREPRDSVTNKLHGSSAMALQRKYSRAILENVRKIGDIILSVEPWTTSKDATLVADVPLQF 1586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00531 1586 ProSiteProfiles TFIIS N-terminal domain profile. 322 408 IPR017923 -
Gma13g00531 1586 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1520 - -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 178 252 - -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 189 217 - -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 848 884 - -
Gma13g00531 1586 Pfam BAH domain 42 147 IPR001025 GO:0003682
Gma13g00531 1586 MobiDBLite consensus disorder prediction 515 537 - -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 955 974 - -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 589 640 - -
Gma13g00531 1586 Gene3D - 33 261 IPR043151 -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 891 915 - -
Gma13g00531 1586 ProSiteProfiles BAH domain profile. 40 155 IPR001025 GO:0003682
Gma13g00531 1586 MobiDBLite consensus disorder prediction 408 669 - -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 783 803 - -
Gma13g00531 1586 CDD TFIIS_I 330 406 - -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 1297 1341 - -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 218 249 - -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 411 426 - -
Gma13g00531 1586 SMART BAH_4 40 155 IPR001025 GO:0003682
Gma13g00531 1586 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1520 - -
Gma13g00531 1586 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 314 419 IPR035441 -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 715 737 - -
Gma13g00531 1586 Pfam TFIIS helical bundle-like domain 356 405 IPR017923 -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 548 573 - -
Gma13g00531 1586 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 273 409 IPR035441 -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 1297 1315 - -
Gma13g00531 1586 MobiDBLite consensus disorder prediction 848 915 - -
Gma13g00531 1586 SMART TFS2_5 328 407 IPR003617 GO:0005634
Gma13g00531 1586 MobiDBLite consensus disorder prediction 434 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00531 Gma-Chr13 17823111 17829518 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Gma13g00531 BAH 4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00531 - - gmx:112998769 2920.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00531 13 17823111 17829518 Gma19g00112 19 1155146 1163332 GST