Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00520 ATGGCATCGGGTGGAACAGAAGCTTTTCCAGATTTGGGTAAACACTGCCAGCACCGCGATTGCAACCAGCTCGATTTTCTTCCTTTCACCTGCGACGGTTGCCAACAGATCTTTTGTTTGGAACACAGATCCTACAAGTCCCACGCGTGCCTGAAATCCGACCACAACAGCAGAAAGGTTGTTGTTTGCGAAGCATGTTCCATGTCCATCGAGACCACCGGCCATGTGGGACAAGACGAGGAGGCAATCTTGCAGAAGCACCTCAAGTCTGGTAATTGTGACCCTACCAAGAAGAAGAAACCAATTTGTCCCGTCAAGCGTTGCAGGGAGGTTTTGACGTTTTCCAACACCAGCACATGTAAAACTTGCCACATTAAGGTGTGCCTCAAGCATCGTTTCCCTGCTGATCATGCCTGTAGCAGAGGAGCTTCAGCTTCTTCATCAGCTTGTGTTTCTAATGGTTTGTGGAACAATCGGTTCTTGACTGCTTTTGCCAAGAGGACTGGACAAGAATGTGCCAAAAATGGTGCAACTTGTTCTACTTCTCCTCCTAGTACACCTTCTGTTAAGGCCTATTGA 579 0.4801 MASGGTEAFPDLGKHCQHRDCNQLDFLPFTCDGCQQIFCLEHRSYKSHACLKSDHNSRKVVVCEACSMSIETTGHVGQDEEAILQKHLKSGNCDPTKKKKPICPVKRCREVLTFSNTSTCKTCHIKVCLKHRFPADHACSRGASASSSACVSNGLWNNRFLTAFAKRTGQECAKNGATCSTSPPSTPSVKAY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00520 192 Gene3D - 2 67 IPR035896 -
Gma13g00520 192 SUPERFAMILY AN1-like Zinc finger 9 58 IPR035896 -
Gma13g00520 192 SMART AN1_Zf_4 103 144 IPR000058 GO:0008270
Gma13g00520 192 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Gma13g00520 192 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Gma13g00520 192 SUPERFAMILY AN1-like Zinc finger 95 148 IPR035896 -
Gma13g00520 192 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Gma13g00520 192 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 6 156 - -
Gma13g00520 192 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 6 156 - -
Gma13g00520 192 Pfam AN1-like Zinc finger 16 52 IPR000058 GO:0008270
Gma13g00520 192 Pfam AN1-like Zinc finger 103 141 IPR000058 GO:0008270
Gma13g00520 192 Gene3D - 78 154 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00520 Gma-Chr13 17660078 17661698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00520 1 172 C2H2 Transcription Factor Family AT3G28210 59.302 4.64e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00520 - - gmx:100500384 387.497