Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00485 ATGGCAAACCCAAAGACACCCATTGTCCTTAATATGAAGGATCTTGTGATAGTTAAACCCTCTAAGCCTGCACCACCTGAACTTCTTGCACTGTCCACCATTGACAAAGCCCTCTCTAAGGCCTTTGTTTACTATTATCCACTTGCTGGAAAGATAGTGACATTTGATGATGGAAAACTTGGAATCAACTGCAATGTTGATGGAATTCCATTCTTGGAGGCAACTGCTAACTATGAACTCTCTTCTCTTCACTACCTTGAAGGGATTGATGTTCCAACTTCACAGAAACTAGTGTTTGATGATGATAACCCTAATAATTCTCATGATCACCCTTTGGTTTTCAAGGTGACCAAGTTTCTCTGTGGGGGTTTCACCCTTGGAATGGGCTTGTCACACAGTGTTTGTGATGGGTTTGGTGCATATAAATTCTTTAGAGCCTTGGCTAAACTTGCAAGTACAGTGGAAAAAGTGAGCCATCAGTGA 483 0.4161 MANPKTPIVLNMKDLVIVKPSKPAPPELLALSTIDKALSKAFVYYYPLAGKIVTFDDGKLGINCNVDGIPFLEATANYELSSLHYLEGIDVPTSQKLVFDDDNPNNSHDHPLVFKVTKFLCGGFTLGMGLSHSVCDGFGAYKFFRALAKLASTVEKVSHQ 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00485 160 Gene3D - 8 160 IPR023213 -
Gma13g00485 160 Pfam Transferase family 12 158 - -
Gma13g00485 160 PANTHER ACYL TRANSFERASE 4 5 36 - -
Gma13g00485 160 PANTHER ACYL TRANSFERASE 4 34 153 - -
Gma13g00485 160 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 36 - -
Gma13g00485 160 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 34 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00485 Gma-Chr13 17213523 17214104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00485 32 155 Monolignol Biosynthesis Gene Families AT5G48930 33.858 4.62e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00485 K20240 - gmx:100801843 235.343