Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00437 ATGGGTTGCATAAGCTCCAAGAATGCGGTTGCCAGAACTTGTTCTCCGTCGCCCGCAGTACTCGACATTGCAGAGCCGAACCCCGCTTATGCCAAGGGCCATTCCTGGTTGACGGTTTTGGAATCCAAAACGGGTTCAGAGGATGAGAGGAGCAATAGCAAGTTCAGGAAGAACAGTTCAAAGAAGAGTAGTGGGTCTTTCAGCTTCAGGCATGTGGAGGCTGAACAGAATGCTGCTGGTTGGCCCCCTTGGCTCATAGCTACTGCAGCAGAAGCCATTCAAGGATGGATCCCTCTCAAAGCTGATTCTTTTCAAAAGTTGGAAAAGATTGGAGAAGGTACATATAGCAGTGTGTTCCGAGCACGTGAAGTTGAAACTGGGAAGATGTTTGCTTTGAAGAAGGTGCGCTTTGACAATTTCCAACCTGAGAGCATTAGGTTCATGGCAAGAGAAATAACAATCCTCCGCAGGCTTGATCACCCAAACATCATGAAATTGGAAGGCATAATCACTTCTCGCCTATCAAACAGCATATACCTTGTGTTTGAATACATGGAGCATGATCTTGCTGGCCTAGTATCACGTCCTGATATTGTGTTCTCCGAATCACAGATAAAATGTTACATGAGGCAACTATTAAGTGGACTTGAGCATTGTCATATGCGTGGCATCATGCATAGAGACATCAAATTATCAAATATCTTGTTGAACAATGAAGGTGTTCTCAAGATAGGAGATTTTGGATTAGCAAATACAATTAGCACAAATAGCAAGCATCATTTGACAAGTCGCGTAGTGACTTTGTGGTATCGCCCTCCTGAGCTCTTGATGGGATCAACCAACTATGGAGTGTCAGTGGATCTGTGGAGTGTGGGCTGTGTATTTGCAGAAATTTTTCTTGGGAAGCCTATCCTTAAGGGGAGAACTGAGGTTGAACAATTACACAAAATTTTTAAGCTGTGTGGTTCTCCACCTGAGGAGTTCTGGAAAAAGACTAAGCTTCCTCATGCAACAATGTTTAAACCTCAGACTAATTATGAAAGCTCTCTTCGGGAGAGGTGTGCAGATTTTCCTGCATCTGCTGTAAATCTACTCGAGACTTTATTGTCGATTGATCCAGGCAACCGAGGGACTGCCTCATCTGCCCTAATGTCTGAGTATTTCAGCACCAAGCCATATGCTTGTAATGCATCAAGCCTGCCAAAGTATCCACCTAGCAAAGAAATGGATGCCAAAAGTATGGGAGATTCATCCAGGAAAAAGACTGGAGGTAAAATGAGAGAGGTTGCAACATCAAGAAGGCAGCAAAGACGGGTTAGTAAAATTTTGCAAGATCCAAACAATTTCGGCAAATCAATTTCAAAAGAGGACACGCAGAACATTTCTGAAAATGCTCGTAGAGATGATGGTAAAGCACATCTTACAAAGGGAAAAGGAGGGGCCATGCACAAAGATTATACAAAGTCTCATTTGGATGCTATGTCTGAGACCTCCCAAATGAATGTTGCTAATGGTAATGGCTATAGTGTGGGATCTAATAATACCTTTACATGGGTAAAAAGGAGAAAACAAGATGCATCTTCAACTCTATCAGATGGATCAAGAAGCAAAATTAGTGCACTGGATCCAAACTTTGCAAAACGCACATATGACTTAACCACACTCAGGGTGTCCATGGATTTAGATCCTGAAGAACTGATGAATGCTCAGGGTGACAGAGGGCGTGCTGTTCGTAAATCAAGATTTGGAAGAGACAACAGATGA 1764 0.4308 MGCISSKNAVARTCSPSPAVLDIAEPNPAYAKGHSWLTVLESKTGSEDERSNSKFRKNSSKKSSGSFSFRHVEAEQNAAGWPPWLIATAAEAIQGWIPLKADSFQKLEKIGEGTYSSVFRAREVETGKMFALKKVRFDNFQPESIRFMAREITILRRLDHPNIMKLEGIITSRLSNSIYLVFEYMEHDLAGLVSRPDIVFSESQIKCYMRQLLSGLEHCHMRGIMHRDIKLSNILLNNEGVLKIGDFGLANTISTNSKHHLTSRVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAEIFLGKPILKGRTEVEQLHKIFKLCGSPPEEFWKKTKLPHATMFKPQTNYESSLRERCADFPASAVNLLETLLSIDPGNRGTASSALMSEYFSTKPYACNASSLPKYPPSKEMDAKSMGDSSRKKTGGKMREVATSRRQQRRVSKILQDPNNFGKSISKEDTQNISENARRDDGKAHLTKGKGGAMHKDYTKSHLDAMSETSQMNVANGNGYSVGSNNTFTWVKRRKQDASSTLSDGSRSKISALDPNFAKRTYDLTTLRVSMDLDPEELMNAQGDRGRAVRKSRFGRDNR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00437 587 Gene3D Transferase(Phosphotransferase) domain 1 187 427 - -
Gma13g00437 587 CDD STKc_CDK9_like 104 388 - -
Gma13g00437 587 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Gma13g00437 587 MobiDBLite consensus disorder prediction 460 480 - -
Gma13g00437 587 SUPERFAMILY Protein kinase-like (PK-like) 98 393 IPR011009 -
Gma13g00437 587 MobiDBLite consensus disorder prediction 450 480 - -
Gma13g00437 587 MobiDBLite consensus disorder prediction 562 587 - -
Gma13g00437 587 SMART serkin_6 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00437 587 PANTHER CYCLIN-DEPENDENT KINASE 1 582 - -
Gma13g00437 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Gma13g00437 587 MobiDBLite consensus disorder prediction 404 438 - -
Gma13g00437 587 Pfam Protein kinase domain 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00437 587 PANTHER CELL DIVISION PROTEIN KINASE 1 582 - -
Gma13g00437 587 MobiDBLite consensus disorder prediction 412 438 - -
Gma13g00437 587 Gene3D Phosphorylase Kinase; domain 1 91 186 - -
Gma13g00437 587 ProSiteProfiles Protein kinase domain profile. 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00437 587 MobiDBLite consensus disorder prediction 566 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00437 Gma-Chr13 16481831 16486927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00437 96 428 Core Cell Cycle Gene Families AT5G10270 47.278 1.39e-108 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Gma13g00437 Pkinase 3.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00437 - - gmx:100787268 1152.5