Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00411 ATGGCAACCGCGAGGACCGTGAAGGATGTTTCGCCTCACGATTTCGTGAAGGCTTACGCCTCCCATCTCAAGCGTTCCGGCAAGATGGAGCTTCCTGAGTGGACTGATATTGTAAAAACAGCAAAATTTAAGGAATTGGCTCCATATGATCCTGACTGGTATTATGTTAGGGCTGCCTCAATGGCAAGAAAGATTTATTTGAGAGGCGGTCTTGGTGTTGGGGCTTTCCAGAGGATCTATGGTGGAAGCAAGAGAAATGGAAGCCGTCCCCCACATTTCTGCAAGAGCAGTGGGGCTATTGCAAGACACATTCTGCAACAATTGCAAAACATGAGCATTGTTGAGATTGATACAAAAGGAGGTAGGAAAATCACATCTAGTGGTCGAAGGGATCTTGATCAAGTTGCTGGGCGAATTGTGGTTGCTGCCTGA 432 0.4699 MATARTVKDVSPHDFVKAYASHLKRSGKMELPEWTDIVKTAKFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMSIVEIDTKGGRKITSSGRRDLDQVAGRIVVAA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00411 143 PANTHER 40S RIBOSOMAL PROTEIN S19 3 141 IPR001266 GO:0003735|GO:0005840|GO:0006412
Gma13g00411 143 PANTHER 40S RIBOSOMAL PROTEIN S19-1-RELATED 3 141 - -
Gma13g00411 143 Gene3D - 1 142 IPR036388 -
Gma13g00411 143 ProSitePatterns Ribosomal protein S19e signature. 90 109 IPR018277 GO:0003735|GO:0005840|GO:0006412
Gma13g00411 143 Pfam Ribosomal protein S19e 6 140 IPR001266 GO:0003735|GO:0005840|GO:0006412
Gma13g00411 143 SUPERFAMILY "Winged helix" DNA-binding domain 6 141 IPR036390 -
Gma13g00411 143 SMART Ribosomal_S19e_2 6 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00411 Gma-Chr13 16233775 16235814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00411 1 141 Cytoplasmic Ribosomal Protein Gene Family AT3G02080 87.943 2.71e-94 267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00411 13 16233775 16235814 Gma19g00266 19 3592213 3594464 GST