Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00401 ATGTTTTCTTTTTCTTCTTCTTTTTCTTCCTCTTCCTCTTCTCATAGCAGTTCAGTGATCAAATGGAATTCTCTCGCGCAATTTCTCTTCCTCGTTTTCTTCCTCTTCTTCGCGTCGCGAAACGACGCCGTTTCGGACAAATCCACGCTCCTTCGCCTGAAGGCCTCGTTCTCCGACCCCGCCGGCGTCCTCTCCACGTGGACCTCCGCCGGCGCCGCTGACTCCGGCCACTGTTCCTTCTCCGGCGTCCTATGCGACTTGAACTCTCGAGTCGTCGCCGTCAACGTCACCGGCGCCGGCGGCAAAAACCGAACCTCGCACCCGTGCTCAAATTTCTCCCAATTCCCTCTCTACGGCTTCGGAATTCGGCGAACCTGTTCCGGTAGCAAAGGTTCTCTCTTCGGAAATGTTTCTTCTCTGAGTTTGATCGCCGAGCTCACGGAGCTTAGGGTTTTGTCTCTCCCCTTCAACGCGTTGGAGGGTGAAATCCCCGAAGCGATTTGGGGCATGGAGAACCTCGAGGTTCTCGATTTAGAAGGGAATTTGATTAGTGGCTATCTTCCCTTGAGAGTCGATGGCTTGAAGAATTTGAGGGTTTTGAATCTGGGGTTTAATAGGATTGTTGGAGAGATACCTAGTTCAATTGGGTCTCTTGAGAGATTGGAGGTTTTGAATTTGGCTGGTAATGAATTGAATGGTTCTGTTCCCGGTTTTGTAGGGAGGCTTAGAGGGGTGTATCTGTCTTTTAATCAGTTAAGTGGGGTTATTCCCAGAGAGATTGGGGAGAATTGTGAGAAGCTTGAGCATTTGGATTTGTCTGTGAATTCGATGGTTGGAGTGATTCCGGGGAGTTTGGGGAATTGTGGGAGGTTGAAGACGCTGTTGTTGTATTCCAATTTGTTGGAAGAGGGCATTCCGGGTGAGCTAGGGAGCCTCAAGAGCCTTGAGGTGTTGGATGTTTCCAGGAACATTCTCAGCAGCTCTGTGCCGAGGGAGCTTGGGAATTGCTTGGAGTTGAGGGTTCTCGTGCTGTCAAATCTATTCGATCCACGAGGGGATGTTGCTGATAGTGATTTGGGGAAGTTGGGGTCTGTGGATAATCAGTTGAATTATTTTGAAGGGGCAATGCCAGCGGAAATTTTGTTGCTTCCGAAGTTGAGGATATTGTGGGCTCCCATGGTGAATTTGGAAGGCGGTTTACAGAGAAGTTGGGGCGGTTGTGAGAGCTTGGAGATGGTGAATTTGGCTCAGAATTTTTTCAGTGGGAAGTTTCCAAACCAGCTTGGTGTTTGCAAGAAGCTGCATTTTGTTGATTTAAGCGCGAACAATCTCACTGGGGAGCTTTCTCAGGAACTTCGTGTTCCCTGTATGAGTGTGTTTGATGTTAGTGGCAACATGTTATCTGGTTCAGTTCCTGATTTCTCCGACAATGCTTGTCCCCCTGTTCCTTCCTGGAATGGCACTCTGTTTGCGGATGGCGACCTATCCCTGCCATATGCATCCTTTTTTATGTCAAAGGTTCGTGAGAGATCACTTTTCACATCAATGGAGGGAGTTGGTACTTCTGTTGTTCACAACTTTGGGCAAAACAGCTTTACTGGCATTCAGTCATTGCCAATAGCACGTGACAGGCTGGGGAAGAAGAGCGGTTACACGTTTCTTGTTGGTGAAAATAATCTTACAGGACCTTTTCCTACTTTTTTATTTGAGAAATGTGATGAATTAGAAGCACTGCTTTTAAACGTCAGTTATAATAGGATATCTGGTCAGATTCCTTCCAATTTTGGTGGAATATGCAGATCATTGAAATTCTTAGATGCATCTGGAAATGAACTTGCAGGACCGATTCCCCTTGATTTAGGGAATTTGGTCTCTCTTGTATCTCTGAACCTCAGTAGGAATCAGTTACAAGGCCAGATTCCCACCAGCCTTGGCCAGATGAAGAACCTGAAGTTTCTTTCTTTGGCTGGTAATAGGTTAAATGGTTTAATTCCTACCAGCCTGGGGCAGTTGTACTCTTTGAAAGTCTTGGACCTTTCGTCAAACTCTCTTACTGGTGAGATTCCCAAGGCTATTGAGAACATGAGAAATCTGACTGATGTTTTGCTCAACAACAACAATCTTTCTGGTCACATTCCTAATGGTTTGGCACATGTCGCTACACTCTCAGCATTCAATGTGTCTTTCAACAACTTATCTGGATCCTTGCCTTCAAATAGTGGCTTGATTAAATGCAGCAGTGCTGTTGGGAATCCGTTTCTAAGTCCCTGCCATGGAGTTTCTCTGAGTGTGCCATCAGTGAATCAACCAGGGCCACCTGATGGCAACTCGTATAATACGGCAACAGCTCAAGCTAATGACAAGAAGAGTGGGAATGGCTTCAGTTCTATTGAAATAGCATCTATAACTTCTGCTTCAGCCATTGTTTCGGTTCTTATAGCCCTGATTGTTCTATTCTTTTACACTCGGAAGTGGAAGCCAAGGTCCAGGGTTGTTGGTTCTATAAGAAAAGAAGTTACAGTGTTTACTGATATTGGGGTCCCGTTGACGTTTGAAACGGTAGTCCAAGCCACAGGAAACTTCAATGCAGGTAACTGTATTGGCAATGGAGGTTTTGGCGCAACATACAAGGCAGAGATATCACCCGGAATCCTGGTGGCTGTCAAACGACTCGCAGTTGGACGTTTCCAAGGTGTTCAACAATTCCATGCTGAGATCAAGACCCTTGGGAGGCTTCATCATCCAAATCTAGTCACTCTGATAGGTTATCATGCTTGTGAAACAGAGATGTTTCTCATATACAACTATTTGTCAGGTGGTAATCTGGAAAAGTTTATCCAGGAGAGGTCAACAAGGGCTGTGGATTGGAAAATTCTTTACAAGATCGCattggacatagcccgtgcacttgcctatctgcatgatacgtgtgttccccgtgttcttcaccgcgatgtcaagcccagcaacatcttgttggatgatgatttcaacgcttatctatctgactttggattggcTAGACTTCTGGGGACTTCAGAGACACATGCTACAACTGGTGTGGCCGGAACATTCGGTTATGTTGCTCCCGAATATGCCATGACGTGCCGTGTTTCTGATAAGGCTGATGTGTACAGCTATGGTGTGGTGCTTCTGGAGTTGCTCTCAGACAAGAAGGCATTGGACCCTTCATTTTCTTCTTATGGAAATGGTTTCAACATAGTGGCATGGGCATGCATGCTACTGAAGCAAGGAAGGGCAAAGGAGTTCTTCACTGCTGGGTTATGGGAAGCAGGACCAGGAGATGATTTGGTAGAAGTGCTTCACTTAGCAGTTGTGTGTACTGTTGACTCTCTCTCTACCAGACCTACAATGAAACAGGTTGTAAGAAGACTTAAGCAACTTCAACCCCCATCATGCTAG 3423 0.4432 MFSFSSSFSSSSSSHSSSVIKWNSLAQFLFLVFFLFFASRNDAVSDKSTLLRLKASFSDPAGVLSTWTSAGAADSGHCSFSGVLCDLNSRVVAVNVTGAGGKNRTSHPCSNFSQFPLYGFGIRRTCSGSKGSLFGNVSSLSLIAELTELRVLSLPFNALEGEIPEAIWGMENLEVLDLEGNLISGYLPLRVDGLKNLRVLNLGFNRIVGEIPSSIGSLERLEVLNLAGNELNGSVPGFVGRLRGVYLSFNQLSGVIPREIGENCEKLEHLDLSVNSMVGVIPGSLGNCGRLKTLLLYSNLLEEGIPGELGSLKSLEVLDVSRNILSSSVPRELGNCLELRVLVLSNLFDPRGDVADSDLGKLGSVDNQLNYFEGAMPAEILLLPKLRILWAPMVNLEGGLQRSWGGCESLEMVNLAQNFFSGKFPNQLGVCKKLHFVDLSANNLTGELSQELRVPCMSVFDVSGNMLSGSVPDFSDNACPPVPSWNGTLFADGDLSLPYASFFMSKVRERSLFTSMEGVGTSVVHNFGQNSFTGIQSLPIARDRLGKKSGYTFLVGENNLTGPFPTFLFEKCDELEALLLNVSYNRISGQIPSNFGGICRSLKFLDASGNELAGPIPLDLGNLVSLVSLNLSRNQLQGQIPTSLGQMKNLKFLSLAGNRLNGLIPTSLGQLYSLKVLDLSSNSLTGEIPKAIENMRNLTDVLLNNNNLSGHIPNGLAHVATLSAFNVSFNNLSGSLPSNSGLIKCSSAVGNPFLSPCHGVSLSVPSVNQPGPPDGNSYNTATAQANDKKSGNGFSSIEIASITSASAIVSVLIALIVLFFYTRKWKPRSRVVGSIRKEVTVFTDIGVPLTFETVVQATGNFNAGNCIGNGGFGATYKAEISPGILVAVKRLAVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHACETEMFLIYNYLSGGNLEKFIQERSTRAVDWKILYKIALDIARALAYLHDTCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACMLLKQGRAKEFFTAGLWEAGPGDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPPSC 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00401 1140 SUPERFAMILY Protein kinase-like (PK-like) 845 1132 IPR011009 -
Gma13g00401 1140 Gene3D Ribonuclease Inhibitor 510 763 IPR032675 -
Gma13g00401 1140 Gene3D Ribonuclease Inhibitor 354 497 IPR032675 -
Gma13g00401 1140 Gene3D Ribonuclease Inhibitor 241 348 IPR032675 -
Gma13g00401 1140 SUPERFAMILY L domain-like 306 474 - -
Gma13g00401 1140 SUPERFAMILY L domain-like 143 737 - -
Gma13g00401 1140 ProSitePatterns Serine/Threonine protein kinases active-site signature. 981 993 IPR008271 GO:0004672|GO:0006468
Gma13g00401 1140 Gene3D Transferase(Phosphotransferase) domain 1 937 1138 - -
Gma13g00401 1140 Pfam Leucine rich repeat 649 708 IPR001611 GO:0005515
Gma13g00401 1140 Pfam Protein kinase domain 864 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00401 1140 Pfam Leucine rich repeat N-terminal domain 45 86 IPR013210 -
Gma13g00401 1140 MobiDBLite consensus disorder prediction 768 790 - -
Gma13g00401 1140 ProSiteProfiles Protein kinase domain profile. 861 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00401 1140 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 27 1139 - -
Gma13g00401 1140 ProSitePatterns Protein kinases ATP-binding region signature. 867 889 IPR017441 GO:0005524
Gma13g00401 1140 CDD STKc_IRAK 867 1135 - -
Gma13g00401 1140 SMART serkin_6 861 1139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g00401 1140 SMART LRR_typ_2 194 218 IPR003591 -
Gma13g00401 1140 SMART LRR_typ_2 239 263 IPR003591 -
Gma13g00401 1140 SMART LRR_typ_2 695 718 IPR003591 -
Gma13g00401 1140 SMART LRR_typ_2 647 670 IPR003591 -
Gma13g00401 1140 SMART LRR_typ_2 146 170 IPR003591 -
Gma13g00401 1140 SMART LRR_typ_2 312 336 IPR003591 -
Gma13g00401 1140 SMART LRR_typ_2 671 694 IPR003591 -
Gma13g00401 1140 SMART LRR_typ_2 623 646 IPR003591 -
Gma13g00401 1140 Gene3D Phosphorylase Kinase; domain 1 825 936 - -
Gma13g00401 1140 Gene3D Ribonuclease Inhibitor 43 240 IPR032675 -
Gma13g00401 1140 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 27 1139 - -
Gma13g00401 1140 Pfam Leucine Rich Repeat 196 218 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00401 Gma-Chr13 16103126 16106927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00401 43 1140 Receptor kinase-like Gene Family AT3G02130 63.450 0.0 1321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Gma13g00401 Pkinase 6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00401 - - gmx:100819882 2165.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00401 13 16103126 16106927 Gma19g00281 19 3776691 3780086 GST