Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00400 ATGATCAACAGCACAAAAGAAGCTGATTTTCCACTAAAACAAGAAGGTCTTTCATCAGGTGATCATGAAAAGGCTAAGGCTCCATCGACCTCATCATCATCATCACAATGGCTAAAACTGAAGGATCCAAGGATTGTTCGTGTGTCTCGAGCCTTCGGAGGAAAAGACAGGCACAGCAAGGTGTGCACAATAAGAGGGCTAAGAGATAGAAGAGTGAGGCTTTCAGTCCCTACAGCAATTCACCTCTATGATCTCCAAGATAGGCTTGGACTCAACCAACCAAGCAAGGTTGTTGATTGGTTGCTCAATGCAGCAAAACATGAAATTGATGAACTTCCACCACTTCCTATTCCTCCAGGTAACTTCACCCTTGGTTATCCCTCTCTTGTTTCTTGTAATGAAGTTAGCACCTCTCGTGAAGGTTCAGGCCAGAACACTTTATTGTGGAAACCAAAATCAGGAGAAATGGTTAGTGATGATAAAGCAAATTGGATGAATAGAAGTGAAGGAGATGATGATAATAATCATAATAATAGTAATGGTAAAGAAGGAAGCAATAATAATATTTGTCATGGTGGTACACTTGTTTTGCCAAATAATCTCTTGCCAAGACCAAACCATCCTTCTTTTTTGAGCTTGATGAACATTATGCCATCACTTGGTTACCAATGGGAGGCTAATAATTCAGCTCATGATGTTAATATTGGTCAATGGCAAAACCATGGATTTCTTAACCAAACAGATGTACACAGCATCAATGTGGTTCCATTTCCATCAACATTGGCTCTATCAACTGGGAGTGATACTACTACTACTTCTCAGATTTTGGTGTGTCCTCCTCATGGAGCAACAACACAGCCATATTTCCCTTCTTCACATCATGTTGCAGCAATGGAGATGAATGCAAGACAAATCAACCACTATCAGATGCTGAGTTCAAGTTCTCATCAAAATCTCTTGGCAAATTCTCTCAATCCATCATCACAGCAACTCATGAGCCAATCAGAGAAATTGCCATTCAGCTTGGGAATTAGGCCTAAACTTTTCCATTCTCCTAACAGAAGTGAAAGCCATTCCCAAAAAGACCAGGATTTGCCTTCCAAGTGA 1107 0.4056 MINSTKEADFPLKQEGLSSGDHEKAKAPSTSSSSSQWLKLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTLGYPSLVSCNEVSTSREGSGQNTLLWKPKSGEMVSDDKANWMNRSEGDDDNNHNNSNGKEGSNNNICHGGTLVLPNNLLPRPNHPSFLSLMNIMPSLGYQWEANNSAHDVNIGQWQNHGFLNQTDVHSINVVPFPSTLALSTGSDTTTTSQILVCPPHGATTQPYFPSSHHVAAMEMNARQINHYQMLSSSSHQNLLANSLNPSSQQLMSQSEKLPFSLGIRPKLFHSPNRSESHSQKDQDLPSK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00400 368 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
Gma13g00400 368 MobiDBLite consensus disorder prediction 163 188 - -
Gma13g00400 368 MobiDBLite consensus disorder prediction 351 368 - -
Gma13g00400 368 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 364 IPR005333 GO:0003700
Gma13g00400 368 MobiDBLite consensus disorder prediction 1 38 - -
Gma13g00400 368 MobiDBLite consensus disorder prediction 24 38 - -
Gma13g00400 368 Pfam TCP family transcription factor 54 172 IPR017887 -
Gma13g00400 368 MobiDBLite consensus disorder prediction 342 368 - -
Gma13g00400 368 MobiDBLite consensus disorder prediction 163 178 - -
Gma13g00400 368 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00400 Gma-Chr13 16057015 16059120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00400 37 124 TCP Transcription Factor Family AT3G02150 84.091 7.10e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma13g00400 TCP 2.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00400 - - gmx:100803100 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00400 13 16057015 16059120 Gma19g00286 19 3855191 3857917 GST