Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00398 ATGTCTAAAAAGGTTTTGACATCAATGAAGGATGAAAATCCAGATTTGCAGAAGCAAATTGGGTGCATCAGTGGGTTTCTTCAGCTGTTTGACCGCCACAGTTTCCTCACAGGTCAAAGCAATAGCAGCCACAATCAGAACATACCAAATAATAAAGGTGGAATCAGCAACCATATCAAAGAGGTGAATAATACAACTCAAAAGGCAACGGCAAATAATGTGAAGGTTGCAAGAGAGAATCAACAATTCTCCACTGAATCATCAGGAACTTCAATGACTTCATCGTCTCGCTCATCTAGCATGTCGTCCCTCGAGTTTAATAGAACAATTCAGATAGAGCCACCACCAATCAATCAAATGAAAATTCCAGAAAACTCTAACTCAGGAGCAGCAATGAAGCAAGGCAGCCAAGGCCATCAACCTCTTGATTTCTATGATATTGTCAAAGAGTCAATGCATAGAGATGTTCATGGATTGTCAGTAAAAACTGTAGCTAAAGAGGAAAAGAAGGGTCGTATCTTGAAATACATTGACTCTCCTAGGCCTTTGGAGCCCTCCAAATTTGTCAATACAGGAGTTATGGTTGCTTGGGATTCACCAAGACTCTCTTATGATGGGAGGGACACACAAGATACATTCAAATCCGCTACAAAGCCAAAGGAACTCCCAAGGCTTTCCTTGGACAGCAGACAAGGATCTATCAAAAGTTTCAATGAAGGAACAAAATCTCGTAGCCTTTTGAAGGGTCCCCAGAAAGGGTATGGTAGCTCCAGTACAATGCAGCTGCAGGAACCAGAAACTTCTAGAAGACCATCCAGTGTTGTAGCAAAGTTAATGGGACTTGAAGCCTTCCCAGACTGCACAGAAACTTGTGATACTCCGCCGCGAATCTCTAGCTGCGCCACCAACAAAAATGAGACAACCGCAGGACCTAGCACAAATGATGAGTACAAGCAACACCAAAGTGCAGCATCATCCCAGAGAACAATCAAGGGGTCTACCTTGCTTCAGTTTAGGAGGGATGCTTCAATCATGAACATGACGCCATATTCACGGTTTTCCCTTGAACCAATTCCGTGGAGGCAACCTGAAGCAAGCCAAGGTTCTCAATTACAGAATTCTAAGAGAAGCGAATCTTCAGCAAAAGCATCAAAACTGTCCCTCTCTGTATATGGGGAAATTGAAAAGAGGATAGCAGATCTAGAGTTCAAAAATTCTGGAAAAGATCTCAGGGCCCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGAATCATTGGATATTCCAAGAGATCAGGTGTCTAATTCTCTATCTGACAATAGAAGTAATAGCAGTCTCAGTGAAAGCTCAATAGTAAAAAGCCCAAGACTACGGCAGAAGGACCCAACATCCACCACTGTTGAGATGTCAAATTCAACCCAGGGTAGTAAGTCGCCGATTTTCATCATGAAACCAGCAAAAGCTGCAAGAAAAACCAATAGTCCAGCTTCCACAGAAATGTCATTTCAGGGTAAATCAGGCCCCAGCAAGTTTAGCCCTGCTAACCGCACAAATGGAATAATGGGTGACAAGCTTGACAGGCAAACAGCAAAGGGTATTGGTCCAGCAATCACACATGCCACAGATCCCATCAGCCAACCCTTTCACTCAGTGAATAAGAGTAATAAGAAGAGAACTTCAAAATTGATGCAATCCTCAAAAGTTCGTCAAGTAATCAATGGAGAAAATGCCACCAACTCCAGCAATACAGCAGAAGCCAAGAGCCCAAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGTTCTCCGCCAACTAGCCCATCATCAGATTTGAGCAGTAACAGAAGACAACAGAATAGGCAATCGGTGGAATTGTCTTCCCCAAGTACAACACCCAGACAAAAATTCAGTGAGATTAGCAATCAAAGGAGGGATTTTAAGCATGAAGTTGACCTAGAAGTCATTCACATTGATCATTCTGATAGGATCAATGGCAACACCATCCAGCTAAAGGGCATTAACCAAAATAATGCTGCAGAAGAGTTGAGCAAGGAAAGCTTTATGGCTGAGAAAACAATTACAGCAGAACAGCCAAGCCCTGTGTCTGTTCTAGATGCTTCTTTCTACAGAGAAGAACCACCTTCTCCAGTTAAAAAGAAATCAGACATCTCAAAAGATTTAGATGATGCTCTGAACACTTATGATAGTAGTGAGGAGAACTCAGAAGATCTTCCACTTTCATCCAACACTACAAAAGCCAACTTCAGCAGTGATACTGACTTGAGAACTCAAAATTTGGTCGAAATTCTCCAACAAATTGACAACAGTGATGAGAGATTCACCAATTTCAGAGACAATAAAGATCCTGATCATAGATATATATCAGAAATACTGTTAGCATCGGGGCTGCTCAGCAGTCCAAGCTCTAGCCAGGTTTTTCATTCATCAAGTTACCCAATAAACCCAAAGTTGTTCCTTGCACTGGAGCAAATCAAGACAAACAAGATGTGCTTCAACATTGAACATAATGCCAAGAATATTACTGGGCTGAATAGTCCTGAGCAAATGCAAAGAAAGCTAATATTTGATGTTGTTAATGACATTCTAGCTCAGAAAATAATATTGGAAAGTTCTACTCTGTGGCGCCAACCAAATCAGCAAGCAGGTAGAAAACTAAGTGGACAGCTGCTTTTGGATGAGCTTTGCACAGAAATTGATAAGTTGCAACATAAAAATACAAATGTCAACCTGGCTGATGAGAATGAGAATTTGACAAGTCTCCTGTGGGAAGAGTTGATGCACTGTCCCACAATTTACACAAACAGTTACAGTGAAATACCAAATGTCGTGTTGGATATTGAACGGTTAATCTTCAAAGATTTGATAACTGAAGTTGTGAGAAGTGAACTAGCTAACCATTCTGGCTCAGCTCCTCCAGAGGTGCTTAATGCCTCAATCGTTGATTTATTGCTTCCTTCGATTCAATACTTTTG 2993 0.4136 MSKKVLTSMKDENPDLQKQIGCISGFLQLFDRHSFLTGQSNSSHNQNIPNNKGGISNHIKEVNNTTQKATANNVKVARENQQFSTESSGTSMTSSSRSSSMSSLEFNRTIQIEPPPINQMKIPENSNSGAAMKQGSQGHQPLDFYDIVKESMHRDVHGLSVKTVAKEEKKGRILKYIDSPRPLEPSKFVNTGVMVAWDSPRLSYDGRDTQDTFKSATKPKELPRLSLDSRQGSIKSFNEGTKSRSLLKGPQKGYGSSSTMQLQEPETSRRPSSVVAKLMGLEAFPDCTETCDTPPRISSCATNKNETTAGPSTNDEYKQHQSAASSQRTIKGSTLLQFRRDASIMNMTPYSRFSLEPIPWRQPEASQGSQLQNSKRSESSAKASKLSLSVYGEIEKRIADLEFKNSGKDLRALKQILDAMQRYKESLDIPRDQVSNSLSDNRSNSSLSESSIVKSPRLRQKDPTSTTVEMSNSTQGSKSPIFIMKPAKAARKTNSPASTEMSFQGKSGPSKFSPANRTNGIMGDKLDRQTAKGIGPAITHATDPISQPFHSVNKSNKKRTSKLMQSSKVRQVINGENATNSSNTAEAKSPRLQKKFGLERRSPPTSPSSDLSSNRRQQNRQSVELSSPSTTPRQKFSEISNQRRDFKHEVDLEVIHIDHSDRINGNTIQLKGINQNNAAEELSKESFMAEKTITAEQPSPVSVLDASFYREEPPSPVKKKSDISKDLDDALNTYDSSEENSEDLPLSSNTTKANFSSDTDLRTQNLVEILQQIDNSDERFTNFRDNKDPDHRYISEILLASGLLSSPSSSQVFHSSSYPINPKLFLALEQIKTNKMCFNIEHNAKNITGLNSPEQMQRKLIFDVVNDILAQKIILESSTLWRQPNQQAGRKLSGQLLLDELCTEIDKLQHKNTNVNLADENENLTSLLWEELMHCPTIYTNSYSEIPNVVLDIERLIFKDLITEVVRSELANHSGSAPPEVLNASIVDLLLPSIQYF 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00398 997 PANTHER LONGIFOLIA PROTEIN 1 976 IPR033334 GO:0051513
Gma13g00398 997 MobiDBLite consensus disorder prediction 737 756 - -
Gma13g00398 997 MobiDBLite consensus disorder prediction 301 332 - -
Gma13g00398 997 MobiDBLite consensus disorder prediction 536 642 - -
Gma13g00398 997 MobiDBLite consensus disorder prediction 602 637 - -
Gma13g00398 997 MobiDBLite consensus disorder prediction 565 589 - -
Gma13g00398 997 MobiDBLite consensus disorder prediction 492 517 - -
Gma13g00398 997 MobiDBLite consensus disorder prediction 363 382 - -
Gma13g00398 997 MobiDBLite consensus disorder prediction 431 480 - -
Gma13g00398 997 MobiDBLite consensus disorder prediction 228 272 - -
Gma13g00398 997 MobiDBLite consensus disorder prediction 38 58 - -
Gma13g00398 997 MobiDBLite consensus disorder prediction 733 756 - -
Gma13g00398 997 Pfam Domain of unknown function (DUF4378) 790 964 IPR025486 -
Gma13g00398 997 MobiDBLite consensus disorder prediction 71 105 - -
Gma13g00398 997 MobiDBLite consensus disorder prediction 229 270 - -
Gma13g00398 997 MobiDBLite consensus disorder prediction 431 523 - -
Gma13g00398 997 PANTHER LONGIFOLIA PROTEIN 1 976 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00398 Gma-Chr13 16037432 16042494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00398 1 971 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.359 2.28e-83 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00398 - - gmx:100793602 1808.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00398 13 16037432 16042494 Gma19g00288 19 3866036 3870593 GST