Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00383 ATGGCGTGGACCTCACGGCGTGTTGAATTGGAACGAGTGTTTGAGATTGATGGCACGCCTTGTTGCGTGATGAATGGTGATGGGTTTGTGGCGTTGTTGATGATGCCAATGGTTTCAGTGGGGCAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATTATAAGCTGGACACCTGATGGCTATGTTGCTGTTGTTACAATGTACAACTTCCAACAATATCGTCATATCTCAGCGCCTGGGTGGTCATTAGGATGGACATGGGCAAAGAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATATAAGGCAAACATCCCACATTGCTGTAAAAAGAACCCTATAGTTGTTGATTTACTTCCCGGAACACCTTACAACCAACAAATTTCAAACTGCTGCAAAGGTGGTGTACTCAGCTCGTGGGCACAGGACCAATCCAAGGCGGTTGCAGCATTTCAAGTCAGTGTAGGTAGTGCCAGTACCACTAACAAAACTGTCAAAGTGCCAAAAGATTTCACACTGAAAGCGCCAGGACCCGGTTACACGTGTGGGCCGGCAACAATTGTGAAACCAACTCAATTTTTACAACCAGACAAAAGGAGAGTGACCCAAGCACTCATGACATGGAATGTGACATGCACATATTCACAATTTCTTGCTCAGAGAACACCCAGTTGCTGTGTCTCGCTCTCATCTTTCTATAACAATACAGTTGTACCCTGCACTACATGTGCATGTGGCTGCCAGGGCAACTCATCTCAATCAGGAGAATGTGTAGATCCAGATTCACCACATTTGCAATCAGTTGTTTCCAACGCTGGACCTGGAAAGAGTAGTATCACACCTTTGGTTCGATGCACTCGTCATATGTGCCCAATCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTCACTGTTACTAATTTTAATTACGGGATGAATTATTCTGATTGGAACTTGGTTGTTCAACATCCAAACTTTGACAATCTGACCCAACTTTTCAGTTTCAACTACAAAGCAATAACTCCCTACGGGTCAATAAATGATACAGCAATGCTTTGGGGACTTAAGTTCTACAATGATTTTCTCATGCAAGCTGGCCCTCTTGGTAATGTACAATCAGAGCTACTATTCAGAAAGGATAAATCAACCTTCACTTTTGACAAGGGTTGGGCCTTCCCTCGGAGAGTCTATTTCAATGGCGACGTTTGTGTGATGTCGCCACCTGATGCTTATCCATGGTTACCTAATGCGGGTTCCAGGCAAGTGGTTTCCCTGCTTGCTTTGGTGATGTCCTCTTTGGTAGCCTTGGTATTATATGCAGATACTTAA 1395 0.443 MAWTSRRVELERVFEIDGTPCCVMNGDGFVALLMMPMVSVGQAYDPLDPNGNITIKWDIISWTPDGYVAVVTMYNFQQYRHISAPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKYKANIPHCCKKNPIVVDLLPGTPYNQQISNCCKGGVLSSWAQDQSKAVAAFQVSVGSASTTNKTVKVPKDFTLKAPGPGYTCGPATIVKPTQFLQPDKRRVTQALMTWNVTCTYSQFLAQRTPSCCVSLSSFYNNTVVPCTTCACGCQGNSSQSGECVDPDSPHLQSVVSNAGPGKSSITPLVRCTRHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYGMNYSDWNLVVQHPNFDNLTQLFSFNYKAITPYGSINDTAMLWGLKFYNDFLMQAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRVYFNGDVCVMSPPDAYPWLPNAGSRQVVSLLALVMSSLVALVLYADT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00383 464 PIRSF COBRA 20 463 IPR006918 GO:0010215|GO:0031225
Gma13g00383 464 PANTHER PROTEIN COBRA 30 463 IPR006918 GO:0010215|GO:0031225
Gma13g00383 464 Pfam COBRA-like protein 67 230 IPR006918 GO:0010215|GO:0031225
Gma13g00383 464 PANTHER COBRA-LIKE PROTEIN 30 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00383 Gma-Chr13 15783072 15787098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00383 26 463 COBRA Gene Family AT3G02210 72.210 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00383 - - gmx:100804568 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00383 13 15783072 15787098 Gma19g00315 19 4354491 4358891 GST
Gma13g00383 13 15783072 15787098 Gma18g02471 18 58779558 58783009 PCT
Gma13g00383 13 15783072 15787098 Gma08g02307 08 22239024 22260755 PCT
Gma18g02472 18 58789363 58792650 Gma13g00383 13 15783072 15787098 PCT
Gma08g02308 08 22271886 22275072 Gma13g00383 13 15783072 15787098 PCT