Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00379 ATGGCTTTGTTGATGACAATTGTAGTAGGTGTCGTCTTGCTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAAGTAAGGTACAGGAAGAAAGGTTTGCCTCCTGGCACAATGGGTTGGCCACTTTTTGGGGAGACAACTGAGTTTCTTAAGCAGGGTCCAAACTTCATGAAAACCCAGAGATCAAGGTATGGCAGTTTTTTCAAATCTCACATACTTGGTTGTCCTACCATTGTTTCCATGGATCCAGAGCTTAATAGATACATCCTAATGAATGAAGCAAAAGGCCTTGTTCCTGGATACCCTCAATCCATGTTGGATATCTTAGGCAAATGCAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGAGCACTGCTTTCCATCATTAGCCCCACCTTGATCAGAGATCAGCTTTTGCAAAAAATTGATCAGTTCATGAGAGCCCACCTTAGCAACTGGGATGACAAAGTCATCAATATTCAAGAGAAAACTAAAGAGATGGCCTTCCTCTCATCCCTGAAGCAGATTGCTGGAATGGAATCTGGCTCATTATCTGACTCATTGATGGCAGAGTTCTTTAAGCTAGTTCTAGGAACCCTTTCTCTCCCTATTAACCTTCCTAGCACAAACTACCACCATGGATTCCAGGCAAGGAAGACTATAGTGAAAATTCTTAGTAAACTCCTAGAGGAAAGAAGAGCATCACATGAAACCTACCATGACATGCTTGGTTGCTTGATGGGAAGAGATGAAAGTAGATACAAACTAAGTGATGAAGAAATCATTGATCTAGTGATTACAATTACGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTGAAGTACCTCCATGACCATCCCAAAGCTCTTGAAGAACTCAGAAAAGAGCATTTGGCCATAAGAGAGAGGAAAAAGCCAGATGAACCTCTTGACTGCAATGATCTCAAGTCAATGAAGTTTACTCGTGCGGTGATATTTGAGACCTCTAGATTGGCTACAATAGTTAATGGGGTCCTAAGGAAAACCACTCAAGACATGGAACTAAACGGCTATTTGATCCCCAAAGGATGGAGAATATATGTGTATACAAGAGAGATAAATTATGACCCTTTTCTATATCCTGATCCACTAACATTCAACCCATGGAGATGGATGGATAAGAGTCTAGAATCTAAAAACTACTTCTTCATATTTGGAGGAGGCACCAGACAGTGTCCAGGAAAAGAGTTGGGAATAACAGAAATTTCCACTTTCTTACACTACTTTGTAACTAGATACAGGTGGGAAGAAGTAGGAGGAGATAAAGTAATGAGATTTCCTAGAGTTGAGGCACCTAATGGACTGCACATAAGGGTGAGATCTTACTAA 1395 0.4108 MALLMTIVVGVVLLLCFCSALLRWNEVRYRKKGLPPGTMGWPLFGETTEFLKQGPNFMKTQRSRYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIRDQLLQKIDQFMRAHLSNWDDKVINIQEKTKEMAFLSSLKQIAGMESGSLSDSLMAEFFKLVLGTLSLPINLPSTNYHHGFQARKTIVKILSKLLEERRASHETYHDMLGCLMGRDESRYKLSDEEIIDLVITITYSGYETVSTTSMMAVKYLHDHPKALEELRKEHLAIRERKKPDEPLDCNDLKSMKFTRAVIFETSRLATIVNGVLRKTTQDMELNGYLIPKGWRIYVYTREINYDPFLYPDPLTFNPWRWMDKSLESKNYFFIFGGGTRQCPGKELGITEISTFLHYFVTRYRWEEVGGDKVMRFPRVEAPNGLHIRVRSY 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00379 464 Pfam Cytochrome P450 35 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Gma13g00379 464 Gene3D Cytochrome P450 25 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 SUPERFAMILY Cytochrome P450 28 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 462 - -
Gma13g00379 464 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g00379 464 PANTHER CYTOCHROME P450 26 6 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00379 Gma-Chr13 15754332 15757636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00379 82 464 Cytochrome P450 AT5G38970 70.573 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00379 K09590 - gmx:100779967 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00379 13 15754332 15757636 Gma19g00319 19 4399818 4403616 GST
Gma13g00379 13 15754332 15757636 Gma18g02476 18 58810800 58814942 PCT
Gma13g00379 13 15754332 15757636 Gma08g02312 08 22325996 22329593 PCT
Gma18g02476 18 58810800 58814942 Gma13g00379 13 15754332 15757636 PCT
Gma08g02312 08 22325996 22329593 Gma13g00379 13 15754332 15757636 PCT