Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00372 ATGGGTTCTGTTTGTTGTTGTTTGAGTTTTGATGATTTTGAAGATTATGTAAATCCAAATAGTCCTGTATATAGGAACTGTGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGATTGTGTATTCTTCAATATTCCGTAGAGGGGATGCACATTCAATTCCTTCATCTATTCAAGGGGCAGCATCTATAACTTCAGCAGCATCACTCGATAATTCTCTATCTGACATGTATCGCTCTCCTCCAAGGCCATTACCATATGATGCAGAACCCAGATATTTCCGCTCGCAACGTGATGGACTAGTTTCAAGGCGTGAGAAGGGTTCAAGTCATTCAAATGAGGAAACAGAACCTCTAAGAAGTAATGCAGATGTGGATCCAGAATCCTTAAATTCAGGAGACAAATGGAAGGAAAGTGCCTGTGAAGCTGGATCAAAGGAATACCGTTCTAAGTCCTCACTAAGACTTCAATCAACAAAATATTCAACTGGAGTTGGTCTTGTCTATGCATCATCAGAGGAGGAGGATGTCTGTCCAACTTGTCTTGAAGAATACACTAAAGAGAATCCAAAGATAATGACAAAATGCTCTCATCATTTTCACCTTGGTTGCATTTATGAGTGGATGGAGAGAAGTGACAACTGTCCTGTCTGTGGAAAGGTGATGGTATTCGATGAAACGACTTTCACTTGA 690 0.4014 MGSVCCCLSFDDFEDYVNPNSPVYRNCVCLSCLIQNLLIVYSSIFRRGDAHSIPSSIQGAASITSAASLDNSLSDMYRSPPRPLPYDAEPRYFRSQRDGLVSRREKGSSHSNEETEPLRSNADVDPESLNSGDKWKESACEAGSKEYRSKSSLRLQSTKYSTGVGLVYASSEEEDVCPTCLEEYTKENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMVFDETTFT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00372 229 ProSiteProfiles Zinc finger RING-type profile. 177 217 IPR001841 -
Gma13g00372 229 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 226 - -
Gma13g00372 229 SMART ring_2 177 217 IPR001841 -
Gma13g00372 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 224 IPR013083 -
Gma13g00372 229 MobiDBLite consensus disorder prediction 99 121 - -
Gma13g00372 229 Pfam RING-H2 zinc finger domain 172 217 IPR024766 GO:0008270
Gma13g00372 229 SUPERFAMILY RING/U-box 172 224 - -
Gma13g00372 229 MobiDBLite consensus disorder prediction 99 136 - -
Gma13g00372 229 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00372 Gma-Chr13 15614052 15620164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00372 1 226 C3H Transcription Factor Family AT5G15790 61.905 7.63e-96 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00372 - - gmx:100790104 479.559