Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00358 ATGCAAACCAAGGAAGTAGTCTCAAGCCTCAGTTACTTACTCCCTTCAAACCCTTGTTCCTACCCTCCTAGCAACAACTACACCTCCATGATCCAAAACAGCATTCCCACATTTCAGTTCCAAAGATTCTCTAACCAAATATATGGCTGCAACAACAGCCACAACACTACCTATCAAGTTCCTGACTTCAGTCCTCAATCCTCATGCATCAGCAGCAACTCCACTTCTGATGAGGCTGATGACCAAAACCTAAGCCTCATCAACGAGAGGAAGCACAGGAGAATGTTATCGAACCGCGAATCGGCGCGTAGGTCACGCATGAGGAAGCAGAAGCACCTTGATGAGCTCTGGTCACAAGTGGTGTGGCTCAGGAATGAGAACCACCAGCTCATAGACAAGCTGAACCATGTCTCAGAGACCCATGACCAAGTGCTCCAAGAGAATTCTCAGCTCAAAGAAGAAGCCTCGGAACTTCGCCAAATGATTAGGGACATGCAGATACACAGTCCTTGCGGTGGCCCAAACTCCTTCATAACCCCTTTGGAAGATCATGATGTTGATCATGTGCCTTCAGCATATCTCAGATCTGATGATTCTTCAAACCAATTCAATTCGTGTAACAACAACATGGACCTCCTTGGCTGA 645 0.4682 MQTKEVVSSLSYLLPSNPCSYPPSNNYTSMIQNSIPTFQFQRFSNQIYGCNNSHNTTYQVPDFSPQSSCISSNSTSDEADDQNLSLINERKHRRMLSNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSETHDQVLQENSQLKEEASELRQMIRDMQIHSPCGGPNSFITPLEDHDVDHVPSAYLRSDDSSNQFNSCNNNMDLLG 214
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00358 214 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 200 IPR044521 -
Gma13g00358 214 Coils Coil 134 168 - -
Gma13g00358 214 SUPERFAMILY Leucine zipper domain 90 140 IPR046347 GO:0003700|GO:0006355
Gma13g00358 214 CDD bZIP_plant_GBF1 91 142 IPR045314 GO:0003700|GO:0006355
Gma13g00358 214 Gene3D - 88 143 - -
Gma13g00358 214 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 93 108 IPR004827 GO:0003700|GO:0006355
Gma13g00358 214 MobiDBLite consensus disorder prediction 194 214 - -
Gma13g00358 214 PANTHER BZIP TRANSCRIPTION FACTOR 1 200 - -
Gma13g00358 214 MobiDBLite consensus disorder prediction 191 214 - -
Gma13g00358 214 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 151 IPR004827 GO:0003700|GO:0006355
Gma13g00358 214 SMART brlzneu 86 150 IPR004827 GO:0003700|GO:0006355
Gma13g00358 214 Pfam bZIP transcription factor 90 148 IPR004827 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma13g00358 Gma-Chr13 15423594 15424491 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00358 58 182 bZIP Transcription Factor Family AT3G30530 67.188 5.57e-52 164
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma13g00358 bZIP_1 5.6e-14 CL0018
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00358 - - gmx:100527640 383.259
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00358 13 15423594 15424491 Gma19g00357 19 5415503 5416374 GST
Gma13g00358 13 15423594 15424491 Gma18g02510 18 59201077 59202031 PCT
Gma13g00358 13 15423594 15424491 Gma08g02354 08 22976335 22977286 PCT
Gma18g02510 18 59201077 59202031 Gma13g00358 13 15423594 15424491 PCT
Gma08g02354 08 22976335 22977286 Gma13g00358 13 15423594 15424491 PCT