Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma13g00358 | ATGCAAACCAAGGAAGTAGTCTCAAGCCTCAGTTACTTACTCCCTTCAAACCCTTGTTCCTACCCTCCTAGCAACAACTACACCTCCATGATCCAAAACAGCATTCCCACATTTCAGTTCCAAAGATTCTCTAACCAAATATATGGCTGCAACAACAGCCACAACACTACCTATCAAGTTCCTGACTTCAGTCCTCAATCCTCATGCATCAGCAGCAACTCCACTTCTGATGAGGCTGATGACCAAAACCTAAGCCTCATCAACGAGAGGAAGCACAGGAGAATGTTATCGAACCGCGAATCGGCGCGTAGGTCACGCATGAGGAAGCAGAAGCACCTTGATGAGCTCTGGTCACAAGTGGTGTGGCTCAGGAATGAGAACCACCAGCTCATAGACAAGCTGAACCATGTCTCAGAGACCCATGACCAAGTGCTCCAAGAGAATTCTCAGCTCAAAGAAGAAGCCTCGGAACTTCGCCAAATGATTAGGGACATGCAGATACACAGTCCTTGCGGTGGCCCAAACTCCTTCATAACCCCTTTGGAAGATCATGATGTTGATCATGTGCCTTCAGCATATCTCAGATCTGATGATTCTTCAAACCAATTCAATTCGTGTAACAACAACATGGACCTCCTTGGCTGA | 645 | 0.4682 | MQTKEVVSSLSYLLPSNPCSYPPSNNYTSMIQNSIPTFQFQRFSNQIYGCNNSHNTTYQVPDFSPQSSCISSNSTSDEADDQNLSLINERKHRRMLSNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSETHDQVLQENSQLKEEASELRQMIRDMQIHSPCGGPNSFITPLEDHDVDHVPSAYLRSDDSSNQFNSCNNNMDLLG | 214 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma13g00358 | 214 | PANTHER | BASIC LEUCINE ZIPPER 43-RELATED | 1 | 200 | IPR044521 | - | |
Gma13g00358 | 214 | Coils | Coil | 134 | 168 | - | - | |
Gma13g00358 | 214 | SUPERFAMILY | Leucine zipper domain | 90 | 140 | IPR046347 | GO:0003700|GO:0006355 | |
Gma13g00358 | 214 | CDD | bZIP_plant_GBF1 | 91 | 142 | IPR045314 | GO:0003700|GO:0006355 | |
Gma13g00358 | 214 | Gene3D | - | 88 | 143 | - | - | |
Gma13g00358 | 214 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 93 | 108 | IPR004827 | GO:0003700|GO:0006355 | |
Gma13g00358 | 214 | MobiDBLite | consensus disorder prediction | 194 | 214 | - | - | |
Gma13g00358 | 214 | PANTHER | BZIP TRANSCRIPTION FACTOR | 1 | 200 | - | - | |
Gma13g00358 | 214 | MobiDBLite | consensus disorder prediction | 191 | 214 | - | - | |
Gma13g00358 | 214 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 88 | 151 | IPR004827 | GO:0003700|GO:0006355 | |
Gma13g00358 | 214 | SMART | brlzneu | 86 | 150 | IPR004827 | GO:0003700|GO:0006355 | |
Gma13g00358 | 214 | Pfam | bZIP transcription factor | 90 | 148 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma13g00358 | Gma-Chr13 | 15423594 | 15424491 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma13g00358 | 58 | 182 | bZIP Transcription Factor Family | AT3G30530 | 67.188 | 5.57e-52 | 164 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Gma13g00358 | bZIP_1 | 5.6e-14 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma13g00358 | - | - | gmx:100527640 | 383.259 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma13g00358 | 13 | 15423594 | 15424491 | Gma19g00357 | 19 | 5415503 | 5416374 | GST | |
Gma13g00358 | 13 | 15423594 | 15424491 | Gma18g02510 | 18 | 59201077 | 59202031 | PCT | |
Gma13g00358 | 13 | 15423594 | 15424491 | Gma08g02354 | 08 | 22976335 | 22977286 | PCT | |
Gma18g02510 | 18 | 59201077 | 59202031 | Gma13g00358 | 13 | 15423594 | 15424491 | PCT | |
Gma08g02354 | 08 | 22976335 | 22977286 | Gma13g00358 | 13 | 15423594 | 15424491 | PCT |