Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00332 ATGTTTCCTTACAGTTCCAACCCCTCCCCTTCCTTCCCTTCATCATCTTCTTCATACCCTCCTTTTCCTTTTCTCAACCTTGAGAATGCTTCTGCAAGCAACACTCTTCTTCATGATGCACTTTCTGTGCCTTACATACCAACTCATCATAACCCTTCAAGCATCCAAGAAGCACTGAACAATTTTCCAGTCACAGATCATAACTGTGGTGGTGGCGGTGGCAGTGGTTCTGCAATGACCAAACCTGACCCTAATGGTGGTGGTGCTCCTCAGTATGGCATTTCTTGTTTTCTCACAAAGAAGCCACCTAAGAAAGACAGGCACAGCAAGATTTACACCTCTCAGGGCTTGAGGGACCGAAGGGTGAGGTTGTCCATTGAGATTGCTCGCAAGTTCTTTGATCTTCAAGACATGCTAGGGTTTGACAAAGCCAGCAACACCCTTGAGTGGCTCTTCAACAAGTCCAAGAGAGCAATTAAGGAGCTTGCAAGGAGCAAGCACAGCAACAACAACAGTGATGAAGGAGCCAAGAGCTTCTCTTCTTCATCTGATTGTGAAGATGGCTGTGAAGTGGTTTCTGAGATCAAGCACAAACAACAACAACTCATCACTTGTGATGCTGCTGCTACTACTCCACACAACCTACAACAAGGGTTGGATTCAGGTGATAACAAGTCACCAACAACATTGATGGCTGCAAAGGAGAGGATGAAGTTGAAGAGGACACAGAAGGAACCTGCAAAGATGAAGGAGTCAAGGGAGAAAGCAAGAGCAAGAGCAAGGGAAAGGACTAGTAACAAGATTATTATGTGCAATGTTAACACCAACAACACAGGAGGGAAGGTGCTACAAGACTTGAAGAAAAAGTGCCCTGCAATTGAAAACAACCACACTCAAATTATGCATCAATCAAGGTCATCACCTACTCATCACCCTCACCACCTTGTGGGAAATGAAACACCTAGAGATGACTTCAACGTTATTGAGGAATCAATTGTGATCAAGAGAAAGTTGAAACCATCTTTGATGTCCTCTTCTGATCATCATCATCATCATCACCAAAACCTTGTGATGCCTAAGGAACCACCAAGCTTCAACAACAACAACAGTGAGTACCACCCCTTCTCCAATTTGTCTCCGAATTGGGATGCTAATGGTTCCACTGGTCGCTCCAACTTCTGTGCCATAGCTAGCATGAATCTATCCACAGGGCTTCAAATCTTTGGAAAGTCTTGGGAGGAGTGCATCAATCCACTATCATCTGATTCGAATGAAACTCTTGTAGTTGGTTGGCCAAGAAATCATATGGAGGCATCTTTCTGTGTTTTCCACCAGAAACTCGTCCTATATTCCCTTTCCACAATGTTTGTACCTCTTCTACCTTTTGCTCATCATCATCTCAGCCAATGGCGTGTGACAGTTGGCAGAAAGCATTTCAAGAAGTTATATGCTTTGTTGCAAGAGGAGGTGCATGATGGTACAGAAGAAATCTCAAGAGGAGCGAGTGGACCAAGCAATGCCGGCAACGGTGCTGGTGCAGTGTGCTTCTTACTCTTCTTCGTCTTCTTCTTTGACTTGGGAGCGGGAACCTCAACGTTGGGTGCTACCACGAGTGCCAGAGTTGTCGATGCCAGTGCAGGGGGAGAGTTCACTAGAACAGGTGCTGGTGGAAAACTCACTGAAACTGGCACTGGTGGCGAGCTCACAGGTGTCACAGCAGGAGGAGTGGTCGCGGGAGGTGTGGCCACCAGAGGAGTGGTTGTTGGAGTTGAAGTAGCAGCTTTAGACGGAGGAGATGCTACTGTGGGAGATGAAACGGGAGGGGTTGCGGTTGCAGCATTGGGGGATGAAGTGGGAGAAACAACAGCGCAGTTGATATTGGTTTAG 1887 0.4648 MFPYSSNPSPSFPSSSSSYPPFPFLNLENASASNTLLHDALSVPYIPTHHNPSSIQEALNNFPVTDHNCGGGGGSGSAMTKPDPNGGGAPQYGISCFLTKKPPKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKHSNNNSDEGAKSFSSSSDCEDGCEVVSEIKHKQQQLITCDAAATTPHNLQQGLDSGDNKSPTTLMAAKERMKLKRTQKEPAKMKESREKARARARERTSNKIIMCNVNTNNTGGKVLQDLKKKCPAIENNHTQIMHQSRSSPTHHPHHLVGNETPRDDFNVIEESIVIKRKLKPSLMSSSDHHHHHHQNLVMPKEPPSFNNNNSEYHPFSNLSPNWDANGSTGRSNFCAIASMNLSTGLQIFGKSWEECINPLSSDSNETLVVGWPRNHMEASFCVFHQKLVLYSLSTMFVPLLPFAHHHLSQWRVTVGRKHFKKLYALLQEEVHDGTEEISRGASGPSNAGNGAGAVCFLLFFVFFFDLGAGTSTLGATTSARVVDASAGGEFTRTGAGGKLTETGTGGELTGVTAGGVVAGGVATRGVVVGVEVAALDGGDATVGDETGGVAVAALGDEVGETTAQLILV 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00332 628 MobiDBLite consensus disorder prediction 163 183 - -
Gma13g00332 628 MobiDBLite consensus disorder prediction 302 321 - -
Gma13g00332 628 MobiDBLite consensus disorder prediction 238 262 - -
Gma13g00332 628 ProSiteProfiles R domain profile. 250 267 IPR017888 -
Gma13g00332 628 MobiDBLite consensus disorder prediction 66 94 - -
Gma13g00332 628 Pfam TCP family transcription factor 104 268 IPR017887 -
Gma13g00332 628 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 16 419 IPR005333 GO:0003700
Gma13g00332 628 ProSiteProfiles TCP domain profile. 104 162 IPR017887 -
Gma13g00332 628 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 16 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00332 Gma-Chr13 14968747 14974245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00332 100 275 TCP Transcription Factor Family AT1G67260 40.341 2.91e-28 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma13g00332 TCP 1.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00332 - - gmx:100801549 802.742