Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00317 ATGTACACCTCGAGGAAGAAAATTCACAAGGATAAGGATGCCGAGCCCACTGAATTTGAGGAGACAGTTGCACAGTACTTGTTTGACTTGGAGAACACCAATCAGGATCTGAAAAGTGACTTGAAAGATCTCTACATAAATCAAGCAATTCAAATGGATGTGGCTGGTAATCGCAAGGCTGTAGTCATCTATGTGCCCTTCAGATTGAGGAAGGCATTCCGCAAGATTCATCTTCGACTTGTCAGAGAGTTGGAGAAGAAGTTTAGTGGGAAGGATGTTGTCTTCATTGCCACAAGGAGGATCGTGCGACCACCTAAGAAAGGCTCTGCTGTTCAGCGACCCCGAACCCGTACTTTGACCGCCGTCCATGATGCCATGCTGGAGGATGTTGTGTATCCTGCAGAGATTGTTGGCAAACGGGTCAGATATAGAATTGATGGCTCAAAAATAATGAAGGTTTTCTTGGACCCCAAGGAGCGCAACAACACTGAGTACAAGCTGGAGACTTTTTCTGGAGTTTATAGAAAGCTTACTGGAAAAGATGTAGTATTTGAGTATCCAATCTCAGAAGCCTGA 576 0.4479 MYTSRKKIHKDKDAEPTEFEETVAQYLFDLENTNQDLKSDLKDLYINQAIQMDVAGNRKAVVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVVFIATRRIVRPPKKGSAVQRPRTRTLTAVHDAMLEDVVYPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFSGVYRKLTGKDVVFEYPISEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00317 191 Coils Coil 27 47 - -
Gma13g00317 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gma13g00317 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gma13g00317 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gma13g00317 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00317 Gma-Chr13 14697449 14699860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00317 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 82.723 4.25e-119 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00317 K02993 - gmx:100500684 378.252