Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00301 ATGACACACCAGAATGCAATCCTAACTGTTGAAAACAAAGATGTTACATTCATCAAACCTTCAAAGCCCACTCCTACCACCATTCTTTCACTGTCTAGCATTGACAATGCTCCCGATAACGATTTCTTCATGCAAAGCCTTCATGTATACCGATGGGAAAATCACAATTCCCCTAATACTCCAAAACTTGGCCCTGCAAAATTGATCAAAGTGGCACTCTCGGAGGCTCTCTTTTACTATTATCCTCTTGCAGGAAAGTTAGTAAGACACGCTGATGGAAAATTCAGAATCAACTGCAACTCCGAAGGAGTTCCATTCATAGAGGCTATTTGTAACTGCAGCCTCTCATCTATTCATTACCTAGATTGCAACGACGTCGAAATCGGAAAACATTTTGCTATCGATTTTCCTTCGGAAGATGAATTTGGAAACCAATACCCTTTGGTTTTCAAGGTGACTAAATTCCTCTGTGGGGGTTTCACATTAGTGATGGGCTTGTCCCACGCTATTTTAGACGGAACTGGGCAATCTCAGTTCTTACGCGCAGTTGCTGAACTTGCAAGTGGAAAAGCTGAGCCCTCTGTGAAGCCCGTGTGGGAAAGAGAAAGACTAGTGGGAACATATACTAGTCAACCAATGCAAAATCCCATGGACAATGCTTCTTTTGCAGTTTCACCATTTCTACCAACCACAGATTATTCGCATGAATGCTCGAAGGTGGACAGTGAGAGCATAAAAAGACTCAAGACGAGTTTGATGAAAGAAAGTGACAACAAAGAAAGTATGAAGAAAAAAGGGTTCACAACTTTTGAAACCCTAGCTGCGTACATCTGGAGGTCAAGAACCAGAGCCATGAAACTGAGTTACGATAGAAAAACATTGCTGGTAATGACAGTAGGGTTGAGACCACACTTGCTGAATCCTTTGCCTGATGGATATTACGGAAACACCATCATGGATGCATTTGTTACGTTAACAGTGAGGGAGCTGAACGAACTACCACTATTGGAGGTTGTGAAACTCATCAGAGAGAGCAAAGAAGTTGCTTTTAGCGATGACTATATCAGACACTCAATCGACAGTATGCATACGAAGCCAATGGAATATTATTATGAAAGAGGTGGAATAACGTTTATAACGGATTGGAGACATTTGGGTTTGTTGGAAAAGGTTGATTTTGGGTGGAAGGAGCCAGTGAATACTATGCCAGTCCCTTCGGACATGTATGGATTAATAGGTTTGTGCAATATCTTTCTTCCAAGTAATTTGGATCCTTCAATGATTGGAGGAGCTAGGGTTTACGCCTCCCTGCCTAGTGCTGCCATGCCCAAGTTCAAGGAAGAGATGAAAGCTCTTACCAGTGTCCATAAGAGAAATTCGAAAATTTAA 1389 0.419 MTHQNAILTVENKDVTFIKPSKPTPTTILSLSSIDNAPDNDFFMQSLHVYRWENHNSPNTPKLGPAKLIKVALSEALFYYYPLAGKLVRHADGKFRINCNSEGVPFIEAICNCSLSSIHYLDCNDVEIGKHFAIDFPSEDEFGNQYPLVFKVTKFLCGGFTLVMGLSHAILDGTGQSQFLRAVAELASGKAEPSVKPVWERERLVGTYTSQPMQNPMDNASFAVSPFLPTTDYSHECSKVDSESIKRLKTSLMKESDNKESMKKKGFTTFETLAAYIWRSRTRAMKLSYDRKTLLVMTVGLRPHLLNPLPDGYYGNTIMDAFVTLTVRELNELPLLEVVKLIRESKEVAFSDDYIRHSIDSMHTKPMEYYYERGGITFITDWRHLGLLEKVDFGWKEPVNTMPVPSDMYGLIGLCNIFLPSNLDPSMIGGARVYASLPSAAMPKFKEEMKALTSVHKRNSKI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00301 462 Coils Coil 245 265 - -
Gma13g00301 462 Gene3D - 6 218 IPR023213 -
Gma13g00301 462 Gene3D - 229 449 IPR023213 -
Gma13g00301 462 Pfam Transferase family 9 451 - -
Gma13g00301 462 PANTHER ACYL TRANSFERASE 4 6 453 - -
Gma13g00301 462 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00301 Gma-Chr13 14451501 14452889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00301 8 447 Monolignol Biosynthesis Gene Families AT5G48930 27.434 1.07e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00301 K20240 - gmx:100783730 937.176