Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00300 ATGAATTTCCTTATTCATCAGCCAATTCAATGTAATGCCACTAACTACGAACCCCAAAATAATAGTCCTATGATCATGCAGTCAAACCTGGAGTTTATTGCCACAATTGAGGAAGAAGCCATCATCAAGTCCAAAGAAAGAAACACAATTAGTACTAAGACAAAGGAGGAGGGTATCTTCCTAACATGGGAGGATTTGCAGGTCACTGTTCCAAATGGAAGGAATGGTAGGAAACCGATTCTTAAGGGTCTAACAGGTTATGCCAAGCCAGGGCAGCTCTTGGCAATAATGGGTCCTTCTGGCTGTGGCAAATCCACACTTCTTGATACTTTAGCAGGAAGACTAGCTCCAAGCACAAAGCAAACAGGGAAAATTTTAATCAATGGCCACAAACATGCACTGGCTTATGGAACATCTGCATATGTGACACATGATGATGCTGTGTTGTCAACATTAACAGTTGGAGAAGCAGTGTACTATTCAGCACATCTCCAATTTCCAGAATCAATGTCCAACAGAGACAAGAAAGAGAAAGCAGATTTTACAATCAGACAAATGGGACTACAAGATGCCACTGACACAAGGATTAAAGGGAAGGGTTCTAAAGGCCTTAGTGAGGGACAGAAGAGAAGACTAGCCATTTGCATCGAGATTCTTACAAGCCCCAAACTTCTCCTTCTTGATGAACCAACTAGTGGCCTGGACAGTGCAGCTTCATACTATGTTATGAGCAGAATTGCAAGTCTAAAGATAAGAGATGGCATCAAAAGGACAATTGTTGTATCCATCCATCAGCCTAGTAGTGAAGTTTTTGAGCTATTTGATAATCTTTGTCTTCTGTCTTCAGGTGAAACAGTTTATTTTGGCCCCACTTCTGCTGCAACCGAGTTTTTTGCTTTAAATGGCTATCCTTGTCCACCTCTCCACAACCCTTCTGATCATTTCTTGAGGATCATAAACAAGGATTTCAAACTGGATGATGAAGAGTGCTTCAACAAAACATTACCCAAAGAAGAAGCAGTTGATATCCTTGTAGGGTTCTATAAATCTTCTGAAATTAGTAACCAAGTTCAGAAAGAAGTAGCAATAATAGGTGAAAGTGAACATGGTTTCATGGAGAGGAACAGAACACAGACTGCATTTCTTACTCAGTGTCACATTCTTGTGAGAAGATCTTCTTTGCATCTGTTTCGTGATGTAAGCAATTATTGGTTACGTCTAGCTGTGTTTGTTCTAGCAGCTATTAGTCTTGGCACTATATTCTTTGACGTTGGTTCAGGTGAATCATCTATCCAGGCTAGAGGGGCCCTGGTCTCTTTTGTTGCTTCAGTTCTGACTTTCATAACCCTTCTTGGTGGATTCCCTCCATTTGTGGAACAAATGAAGGTATTTCAACGAGAGAGATTGAATGGGCACTATGGTGTCGCTGCTTTTGTAATTAGCCACACATTATCTCCTATTCCATATATGGTACTAATGTCACTGATTCCTGGAGTGATCACTTACTACCTTTCTGGACTTCACACGGGACTTGAACGTTGCCTATACTTTTCTTGTGTGCTACTTGCATGCATATTGTGGGTTGAGAGCCTCATGATGGTGGTTTCAAGTATCTTCCCAAATCCAAACACAGGCATCACAGTCTCTGGTGGAATCATGGGAATCATGATCTTAACTGGTGGATTCTTTCGCCTGCCAAATGATCTTCCCAAACCATTTTGGAAGTACCCTATGTACTATGTTTCCTTCCACAAATATGCCTTCCAAGGATTGTTCAAGAATGAGTTTATTGGCTTGAATTTGGCTAGTGATCAAGATGGAGGTGCCTACATAAGTGATAAAGAAATACTGACGAAGATATGGCAAGTGGAAATGGGTCACTCAAAGTGGGTTGATCTTGCTATCTTGGTGGGGATAATTGTTTTGTATAGACTTATGTTCTTGGCGATCATTAAGAGCAAGGAGAAGATGAAGGCTTGA 1980 0.4096 MNFLIHQPIQCNATNYEPQNNSPMIMQSNLEFIATIEEEAIIKSKERNTISTKTKEEGIFLTWEDLQVTVPNGRNGRKPILKGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLAPSTKQTGKILINGHKHALAYGTSAYVTHDDAVLSTLTVGEAVYYSAHLQFPESMSNRDKKEKADFTIRQMGLQDATDTRIKGKGSKGLSEGQKRRLAICIEILTSPKLLLLDEPTSGLDSAASYYVMSRIASLKIRDGIKRTIVVSIHQPSSEVFELFDNLCLLSSGETVYFGPTSAATEFFALNGYPCPPLHNPSDHFLRIINKDFKLDDEECFNKTLPKEEAVDILVGFYKSSEISNQVQKEVAIIGESEHGFMERNRTQTAFLTQCHILVRRSSLHLFRDVSNYWLRLAVFVLAAISLGTIFFDVGSGESSIQARGALVSFVASVLTFITLLGGFPPFVEQMKVFQRERLNGHYGVAAFVISHTLSPIPYMVLMSLIPGVITYYLSGLHTGLERCLYFSCVLLACILWVESLMMVVSSIFPNPNTGITVSGGIMGIMILTGGFFRLPNDLPKPFWKYPMYYVSFHKYAFQGLFKNEFIGLNLASDQDGGAYISDKEILTKIWQVEMGHSKWVDLAILVGIIVLYRLMFLAIIKSKEKMKA 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00300 659 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 307 IPR003439 GO:0005524
Gma13g00300 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 300 IPR027417 -
Gma13g00300 659 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 659 - -
Gma13g00300 659 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 1 659 - -
Gma13g00300 659 Pfam ABC-2 type transporter 383 596 IPR013525 GO:0016020|GO:0140359
Gma13g00300 659 Pfam ABC transporter 81 232 IPR003439 GO:0005524
Gma13g00300 659 Pfam ABC-2 type transporter 264 336 IPR043926 GO:0140359
Gma13g00300 659 SMART AAA_5 90 284 IPR003593 -
Gma13g00300 659 Gene3D - 59 301 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00300 Gma-Chr13 14427124 14432017 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00300 91 268 Calmodulin-binding Proteins AT2G36910 28.191 3.35e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00300 K05681 - gmx:100784793 1299.26