Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00298 ATGGCTTCCCTTCTCTCATCTAATTCTGCTGCTCCTAGTCATTATGAAGTTAATCCTAACTCAAGATTTGAGGCTACTTTGATAGAAGAAACATGTAGTGCTCAAAAACCAAAAGGGACCAAAGGAGGAGAAACTTCAGGTTGGAATAATAATGAGAGAGAAGAGAAGGGTACGTGCTTGAGTTGGAAGGATGTAAGGGTGACTGCTTCTGTGGGAAAGAATGGAAGCAAATCAATTCTTGAGGGTCTAACTGGTTATGCCAAGCCAGGGCAACTCTTGGCCATAATGGGTCCTTCTGGCTGTGGAAAATCTACACTTCTTGATACCTTAGCAGGTATATTAGGTTCCAACACAAGGCAAACTGGGGAGATTCTGATCAACGGGAAGAAACAAGCACTGGCATATGGAACCTCAGCATATGTAACACAAGATGATACCTTACTCACAACCTTAACGGTTGGAGAAGCAGTGCACTATTCAGCTCAACTCCAATTACCTGACACCATGCCCAAAGAAGAGAAGAAAGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACACCAGAATTGGAGGGTGGGGTGTTAAGGGAATCAGTGGGGGTCAGAAGAGGAGAGTGAGCATTTGCATTGAGATTCTAACTCGACCAGGGCTTCTGTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCTTCCTATTATGTCATGAAAAGAATTGCCACCCTTGATAAGAAAGATGATGTTCACAGAACTGTTGTTGCCTCAATTCATCAACCTAGTAGTGAAGTTTTTCAACTTTTTGACAACCTTTGTCTTTTGTCTTCTGGTAGAACTGTTTACTTTGGACCCGCTTCTGCTGCAAAAGAGTTTTTCGCTTCAAATGGCTTTCCTTGTCCTCCTCTCATGAATCCATCTGATCATTTACTTAAAACCATAAACAAAGATTTTGATCAGGACACTGAGTTGAATTTAGGAGGAACAGTAACAATACCCACCGAAGAAGCAATTCGTATCCTTGTAGATTCATACAAGTCATCTGAAATGAACCATGAAGTTCAGAAAGAAGTGGCAGTACTAACTGAAAAGAACACCAGTTCAACAAACAAGAAGAGAAGACATGCTGGCTTCCTTAACCAGTGCTTTGCTCTAACCAAAAGATCGTCCATTAACATGTATCGTGATCTAGGCTATTACTGGTTACGCCTTGCCATTTATATTGCATTGGCTATAAGTTTAGCCACTATTTTCTATGATCTGGGTACTAGTTATCGCTCAATTCAGGATAGAGGTTCATTTCTTATGTTTGTGTCTTCATTCATGACTTTCATGACCATTGGCGGATTCCCTTCCTTTGTGGAGGATATGAAGGTGTTTGAACGTGAAAGACTAAATGGACATTATAGTGTCACTGCATTTGTGATTGGGAACACCTTTTCAGCAATCCCATACTTGTTGTTGGTTTCAATCATTCCTGGGGCTATAGCCTATTACCTACCTGGTCTTCAGAAAGACTTTGAGCACTTTGTGTACTTCATTTGCGTTCTCTTTGCTTGCCTGATGCTAGTAGAGAGCCTTATGATGATAGTTGCAAGCATTGTCCCCAACTTTCTAATGGGTATCATAACCGGGGCTGGAATTCAAGGAATCATGATTATAGGTGGTGGATTCTTTAGGTTACCAAATGATCTTCCTAGGCCATTTTGGAAATACCCTATGTTCTATGTTGCATTCCATAGATATGCCTACCAAGGATTGTTCAAAAATGAGTTTGAAGGACTAAGATTCGCTACAAATAACGTTGGTGGTGGCTACATTAGTGGTGAAGAGATTCTAAGAGATATGTGGCAAGTGAACATGAGTTACTCAAAGTGGTTTGATCTTGGAATCTTGCTAGGGATGATTATTCTGTATCGTGTTCTCTTTTTGATTAACATCAAAACTACTGAGAAGCTGAAGCCAATCATTGTATCATTCATGTCATCATCAAGGTCTTCACCTAAGCCAACAATACAGATCATGCAGAATCCCAATGCAACTCCTTTACAAGAAGTTCAAGTCATATAA 2082 0.4049 MASLLSSNSAAPSHYEVNPNSRFEATLIEETCSAQKPKGTKGGETSGWNNNEREEKGTCLSWKDVRVTASVGKNGSKSILEGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGILGSNTRQTGEILINGKKQALAYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMPKEEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPGLLFLDEPTSGLDSAASYYVMKRIATLDKKDDVHRTVVASIHQPSSEVFQLFDNLCLLSSGRTVYFGPASAAKEFFASNGFPCPPLMNPSDHLLKTINKDFDQDTELNLGGTVTIPTEEAIRILVDSYKSSEMNHEVQKEVAVLTEKNTSSTNKKRRHAGFLNQCFALTKRSSINMYRDLGYYWLRLAIYIALAISLATIFYDLGTSYRSIQDRGSFLMFVSSFMTFMTIGGFPSFVEDMKVFERERLNGHYSVTAFVIGNTFSAIPYLLLVSIIPGAIAYYLPGLQKDFEHFVYFICVLFACLMLVESLMMIVASIVPNFLMGIITGAGIQGIMIIGGGFFRLPNDLPRPFWKYPMFYVAFHRYAYQGLFKNEFEGLRFATNNVGGGYISGEEILRDMWQVNMSYSKWFDLGILLGMIILYRVLFLINIKTTEKLKPIIVSFMSSSRSSPKPTIQIMQNPNATPLQEVQVI 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00298 693 MobiDBLite consensus disorder prediction 31 55 - -
Gma13g00298 693 Pfam ABC transporter 82 231 IPR003439 GO:0005524
Gma13g00298 693 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 306 IPR003439 GO:0005524
Gma13g00298 693 Gene3D - 46 301 IPR027417 -
Gma13g00298 693 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 51 687 - -
Gma13g00298 693 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 51 687 - -
Gma13g00298 693 Pfam ABC-2 type transporter 263 318 IPR043926 GO:0140359
Gma13g00298 693 Pfam ABC-2 type transporter 385 596 IPR013525 GO:0016020|GO:0140359
Gma13g00298 693 ProSitePatterns ABC transporters family signature. 203 217 IPR017871 GO:0005524
Gma13g00298 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 297 IPR027417 -
Gma13g00298 693 SMART AAA_5 89 283 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00298 Gma-Chr13 14400566 14406031 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00298 90 245 Calmodulin-binding Proteins AT2G36910 29.448 4.63e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00298 K05681 - gmx:100813462 1311.59